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The map label for this gene is xhlB [H]

Identifier: 52785250

GI number: 52785250

Start: 1459717

End: 1459980

Strand: Direct

Name: xhlB [H]

Synonym: BLi01485

Alternate gene names: 52785250

Gene position: 1459717-1459980 (Clockwise)

Preceding gene: 52785249

Following gene: 52785251

Centisome position: 34.57

GC content: 44.7

Gene sequence:

>264_bases
ATGACAACATTCGACAAAGGCACGGTCGTCCGGACGGTGCTTCTTTTTATTGCATTGGTAAACCAGACATTGATCATGTT
CGGAAAAGCAGCTTTGCCTATCAGCGAGGACCAGGTGAATACGTTGGCCGACGCTTTGTATTTGGCCGGTTCCACGGCAT
TCACCATCATTACGTCTGTGGTCGCTTGGTTCAAAAATAACTATGTCACTGGCAAAGGAAAGCAGCAAAAAGAAGTTCTA
AAACAAAAAGGGTTAACGAAATGA

Upstream 100 bases:

>100_bases
CATAACAGGCGCGATCATCACAGCGGTGTGTACACTGGTGATCTCCGGGATTGCGGCGCTTTTCATTAATTTTATTCAAA
AATAAGGAGGAAGACACAAT

Downstream 100 bases:

>100_bases
GGTTGCCGGCTGGCAGCCTTTTAATAATTTAAAGGAGGATTTTAATAATGGGAATCAAAGGAATCGACGTATCACACTGG
CAAGGTAATATCAATTGGAA

Product: XhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTTFDKGTVVRTVLLFIALVNQTLIMFGKAALPISEDQVNTLADALYLAGSTAFTIITSVVAWFKNNYVTGKGKQQKEVL
KQKGLTK

Sequences:

>Translated_87_residues
MTTFDKGTVVRTVLLFIALVNQTLIMFGKAALPISEDQVNTLADALYLAGSTAFTIITSVVAWFKNNYVTGKGKQQKEVL
KQKGLTK
>Mature_86_residues
TTFDKGTVVRTVLLFIALVNQTLIMFGKAALPISEDQVNTLADALYLAGSTAFTIITSVVAWFKNNYVTGKGKQQKEVLK
QKGLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SPP1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006479
- ProDom:   PD008023 [H]

Pfam domain/function: PF04688 Phage_holin [H]

EC number: NA

Molecular weight: Translated: 9510; Mature: 9379

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFDKGTVVRTVLLFIALVNQTLIMFGKAALPISEDQVNTLADALYLAGSTAFTIITSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
VAWFKNNYVTGKGKQQKEVLKQKGLTK
HHHHHCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TTFDKGTVVRTVLLFIALVNQTLIMFGKAALPISEDQVNTLADALYLAGSTAFTIITSV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
VAWFKNNYVTGKGKQQKEVLKQKGLTK
HHHHHCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7902527 [H]