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The map label for this gene is dppC [H]

Identifier: 52785162

GI number: 52785162

Start: 1392368

End: 1393327

Strand: Direct

Name: dppC [H]

Synonym: BLi01394

Alternate gene names: 52785162

Gene position: 1392368-1393327 (Clockwise)

Preceding gene: 52785161

Following gene: 52785163

Centisome position: 32.97

GC content: 53.96

Gene sequence:

>960_bases
ATGAGCCTTCCAGTCCGCACAGAAAAAGAAGCGTCTTCAGGCAGTGATATCCCTGTTGAATGGTTTGCCCCGCTGAAACA
GAAGCAGGATGAGCGTGAATCCGTCGCAAGGCCGAGTCTGTCATATTGGCAGAACGCCTGGCGGATTTTAAGGAAAAACA
AGCTGGCGATGGCGGGATTGGGCGTGTTAATCTTCCTGTTCTTCATGGCTGCTCTCGGACCGGTTCTTTCTCCGCACAGC
GTCACCCAGCAGACGCTATCCGAGCAAAACCTGCCTCCGTCGACGGAGCATTGGTTCGGAACTGATGAGCTCGGACGCGA
TGTGTTTACAAGAACGTGGTACGGAGCGAGGATTTCTCTGTTTGTCGGTGTTATGGCGGCTTTGATCGATTTTGCAATCG
GCGTCATCTACGGCGGCATCGCCGGCTATAAAGGCGGCAAAACAGACCACGCCATGATGCGGGTCATCGAAGTGCTGCAC
GGACTGCCTTATTTATTGGTCGTCATTCTTCTCATGGTCATGATGGGGCCTGGACTCGGGACGATCCTCGTCGCGCTGAC
TGTCACCGGCTGGGTCGGCATGGCGCGGATCGTCAGGGGGCAGGTTTTGAAGGTGAAGCATGATGAGCATGTTCTCGCAT
CCAAAACCTTCGGAGCGAAAACGGTAAGGATCATCAGGCGGAATCTGCTTCCTAACATGATGGGAGCGATCATCGTCCAG
ATGACCTTGACGGTGCCGTCGGCCATTTTTGCCGAGGCATTTCTCAGTTTCCTCGGTTTGGGCATTCAAGCCCCGTTTGC
GAGCTGGGGTGTCATGGCGAACGACGGCCTTCCGGTGATCTTGTCGGGACACTGGTGGCGGCTGTTTTTTCCCGCTTTCT
TTATTTCATTAACTATGTTCGCCTTTAATGTTGTTGGAGACGGACTGCAGGATGCGTTAGATCCGAAGCTGAGGAGGTAA

Upstream 100 bases:

>100_bases
GTTTTTTACAGCATCATCCTCATCATCATGTTGTTTCTCGTTGACATGGCCTACGGAATACTGGATCCGCGTATTAAACT
GCATAAGAAAGGGTGAGCTT

Downstream 100 bases:

>100_bases
TGTATTTTTGCGGAAAAAAGTATTGGAAGTCGAGAATTTGCATGTTTCATTTACGACATACGGCGGAACGGTCAAAGCCG
TCCGCGGCGTGAGCTTTGAG

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSLPVRTEKEASSGSDIPVEWFAPLKQKQDERESVARPSLSYWQNAWRILRKNKLAMAGLGVLIFLFFMAALGPVLSPHS
VTQQTLSEQNLPPSTEHWFGTDELGRDVFTRTWYGARISLFVGVMAALIDFAIGVIYGGIAGYKGGKTDHAMMRVIEVLH
GLPYLLVVILLMVMMGPGLGTILVALTVTGWVGMARIVRGQVLKVKHDEHVLASKTFGAKTVRIIRRNLLPNMMGAIIVQ
MTLTVPSAIFAEAFLSFLGLGIQAPFASWGVMANDGLPVILSGHWWRLFFPAFFISLTMFAFNVVGDGLQDALDPKLRR

Sequences:

>Translated_319_residues
MSLPVRTEKEASSGSDIPVEWFAPLKQKQDERESVARPSLSYWQNAWRILRKNKLAMAGLGVLIFLFFMAALGPVLSPHS
VTQQTLSEQNLPPSTEHWFGTDELGRDVFTRTWYGARISLFVGVMAALIDFAIGVIYGGIAGYKGGKTDHAMMRVIEVLH
GLPYLLVVILLMVMMGPGLGTILVALTVTGWVGMARIVRGQVLKVKHDEHVLASKTFGAKTVRIIRRNLLPNMMGAIIVQ
MTLTVPSAIFAEAFLSFLGLGIQAPFASWGVMANDGLPVILSGHWWRLFFPAFFISLTMFAFNVVGDGLQDALDPKLRR
>Mature_318_residues
SLPVRTEKEASSGSDIPVEWFAPLKQKQDERESVARPSLSYWQNAWRILRKNKLAMAGLGVLIFLFFMAALGPVLSPHSV
TQQTLSEQNLPPSTEHWFGTDELGRDVFTRTWYGARISLFVGVMAALIDFAIGVIYGGIAGYKGGKTDHAMMRVIEVLHG
LPYLLVVILLMVMMGPGLGTILVALTVTGWVGMARIVRGQVLKVKHDEHVLASKTFGAKTVRIIRRNLLPNMMGAIIVQM
TLTVPSAIFAEAFLSFLGLGIQAPFASWGVMANDGLPVILSGHWWRLFFPAFFISLTMFAFNVVGDGLQDALDPKLRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=42.1926910299003, Blast_Score=204, Evalue=8e-54,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=36.9175627240143, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787760, Length=290, Percent_Identity=35.1724137931034, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1789964, Length=296, Percent_Identity=37.8378378378378, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=35.8333333333333, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=34.2105263157895, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=30.3754266211604, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35186; Mature: 35055

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPVRTEKEASSGSDIPVEWFAPLKQKQDERESVARPSLSYWQNAWRILRKNKLAMAGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
GVLIFLFFMAALGPVLSPHSVTQQTLSEQNLPPSTEHWFGTDELGRDVFTRTWYGARISL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FVGVMAALIDFAIGVIYGGIAGYKGGKTDHAMMRVIEVLHGLPYLLVVILLMVMMGPGLG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
TILVALTVTGWVGMARIVRGQVLKVKHDEHVLASKTFGAKTVRIIRRNLLPNMMGAIIVQ
HHHHHHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MTLTVPSAIFAEAFLSFLGLGIQAPFASWGVMANDGLPVILSGHWWRLFFPAFFISLTMF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEECCCCCEEECCCHHHHHHHHHHHHHHHH
AFNVVGDGLQDALDPKLRR
HHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure 
SLPVRTEKEASSGSDIPVEWFAPLKQKQDERESVARPSLSYWQNAWRILRKNKLAMAGL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH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HHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]