Click here to switch to the map view.

The map label for this gene is yitU [H]

Identifier: 52784975

GI number: 52784975

Start: 1214161

End: 1214973

Strand: Reverse

Name: yitU [H]

Synonym: BLi01203

Alternate gene names: 52784975

Gene position: 1214973-1214161 (Counterclockwise)

Preceding gene: 52784985

Following gene: 52784974

Centisome position: 28.77

GC content: 46.74

Gene sequence:

>813_bases
ATGGAGACAAAACCATATTTAATTGCATTGGACTTAGACGGTACATTATTAAAAGACGACAAGACCATCTCGGAAAGCTC
CAGCGAAGTCATCCGCAAGCTGCGGGAAGATGGACATTACGTGTGCATTTCTACGGGAAGACCGTTCAGAGCAAGCTCCA
TGTATTATGATCAGCTCCAGCTCGATACGCCGATCGTCAATTTCAACGGCGCGTTTGTCCATCACCCTAAAGATGAAAGC
TGGGGACGCTTCCATACATCTCTTGATCTCGAGGTGGTCAAACAGATCATTGAAGTCAGCGAAACGTACAACGTACATAA
TATCCTTGCTGAAATTGTCGATGATGTTTATTTTCATTATCATGACGAAAAGCTGATTGATGTCTTTACGATGGGCAGCC
CGAATATTACAGTCGGAGATTTAAGAACAAACCTCGGCCAGGATGTGACAAGCGTATTGATTCACGCAAAAGAAGAGGAT
GTTCCGGCGATCCGCTCCTATCTGTCAGACGTACACGCAGAGATGGTCGACCATAGAAGATGGGCGGCCCCGTGGCATGT
AATCGAACTGATTAAAAGCGGCATCAATAAAGCGGTCGGCTTAGAGAAAATCACGGACTACTACGGAATCCCGCCTGAGC
GGGTCATTGCCTTCGGCGATGAAGACAACGACCTTGAAATGCTTGAGTTCGCAGGCTGCGGAGTAGCGATGGGCAACGGC
ATCGAAGGGGTAAAAAGCGTTGCAAACAAGGTCACGAAATCGAATGAGGAAGACGGAATCGCAGTCTTTTTAAAGGATTA
CTTCGCTTTATAA

Upstream 100 bases:

>100_bases
GATGTCCATCATCATAAGTTTAACATGTAGACAATAAAGAAGGTAAAAAGATACACTATAGGTAAGTCAGAACTTTCAAA
TTCACATTAAAGGAGCATTT

Downstream 100 bases:

>100_bases
TTTTATAATTTGCCATTCATAAACGGCTTTTCAAAACGGCCATACTATGAGAAGACGGCCGCACCGGACCGTCACTTGTG
TTAAGGGGGAATTCAAGATG

Product: YitU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFRASSMYYDQLQLDTPIVNFNGAFVHHPKDES
WGRFHTSLDLEVVKQIIEVSETYNVHNILAEIVDDVYFHYHDEKLIDVFTMGSPNITVGDLRTNLGQDVTSVLIHAKEED
VPAIRSYLSDVHAEMVDHRRWAAPWHVIELIKSGINKAVGLEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNG
IEGVKSVANKVTKSNEEDGIAVFLKDYFAL

Sequences:

>Translated_270_residues
METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFRASSMYYDQLQLDTPIVNFNGAFVHHPKDES
WGRFHTSLDLEVVKQIIEVSETYNVHNILAEIVDDVYFHYHDEKLIDVFTMGSPNITVGDLRTNLGQDVTSVLIHAKEED
VPAIRSYLSDVHAEMVDHRRWAAPWHVIELIKSGINKAVGLEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNG
IEGVKSVANKVTKSNEEDGIAVFLKDYFAL
>Mature_270_residues
METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFRASSMYYDQLQLDTPIVNFNGAFVHHPKDES
WGRFHTSLDLEVVKQIIEVSETYNVHNILAEIVDDVYFHYHDEKLIDVFTMGSPNITVGDLRTNLGQDVTSVLIHAKEED
VPAIRSYLSDVHAEMVDHRRWAAPWHVIELIKSGINKAVGLEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNG
IEGVKSVANKVTKSNEEDGIAVFLKDYFAL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=279, Percent_Identity=30.4659498207885, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1786982, Length=279, Percent_Identity=32.6164874551971, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI87081741, Length=243, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787043, Length=270, Percent_Identity=23.3333333333333, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081790, Length=257, Percent_Identity=25.6809338521401, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30378; Mature: 30378

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFRASSMYYDQLQ
CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEHHHEE
LDTPIVNFNGAFVHHPKDESWGRFHTSLDLEVVKQIIEVSETYNVHNILAEIVDDVYFHY
CCCCEEECCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEE
HDEKLIDVFTMGSPNITVGDLRTNLGQDVTSVLIHAKEEDVPAIRSYLSDVHAEMVDHRR
CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
WAAPWHVIELIKSGINKAVGLEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEECCCC
IEGVKSVANKVTKSNEEDGIAVFLKDYFAL
HHHHHHHHHHHHCCCCCCCEEEEHHHHHCC
>Mature Secondary Structure
METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFRASSMYYDQLQ
CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEHHHEE
LDTPIVNFNGAFVHHPKDESWGRFHTSLDLEVVKQIIEVSETYNVHNILAEIVDDVYFHY
CCCCEEECCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEE
HDEKLIDVFTMGSPNITVGDLRTNLGQDVTSVLIHAKEEDVPAIRSYLSDVHAEMVDHRR
CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
WAAPWHVIELIKSGINKAVGLEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEECCCC
IEGVKSVANKVTKSNEEDGIAVFLKDYFAL
HHHHHHHHHHHHCCCCCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]