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The map label for this gene is yybO [H]

Identifier: 52784896

GI number: 52784896

Start: 1124570

End: 1125811

Strand: Direct

Name: yybO [H]

Synonym: BLi01124

Alternate gene names: 52784896

Gene position: 1124570-1125811 (Clockwise)

Preceding gene: 52784894

Following gene: 52784898

Centisome position: 26.63

GC content: 35.83

Gene sequence:

>1242_bases
GTGGAAAAAACAATTAAACATGACCCCAATTATTACAAAAAGATAATTATTGCATTGTGTTTAGGGTGGGTCGCTATTTG
GATTTATCGTACAATACTTACGCCAATATATCCGCAGATTCAAGAATCATTAGGGAATATTAGTGACACGCAAATAGGGT
TGGTTGCTTCTATTTATTTCTTTGCATATACGGGTATGCAAATTCCATCAGGAGCACTTGTCGATAAATTTGGACAAAAA
AAGGTGTTAATTCCTGCATTTATCGTTTTTGCGCTGGCTACATTTGTGATTGGCACAAGTTCAACTATCATGCAAGTATA
CATTGGTTCGTTATTGGCTGGTATTTCGACTGGTTCATATTACGGTGCAGCCTTTTCCTTATCAGCTAAACATACGCCAA
AAGATAAAAAAAGCTTTTCCAATGCGATTATAAATAGCGGTTCAGCATTAGGGATGGTAATTGGACTAATCGGATCATCG
GTTTTAGTAGGCGGTTTTGAAATTCAATGGAATTATATGCTTTTTATAACAGCTATCGTTATCGTAGCTGTAACATTTGT
GTTTGTGCTGTTTATTAAACAAGATAAAACATCAGATAAGGAAGTGGCTGAAGAGAAGAAAGACACTGTACAAAGCACAG
ATATTCAAAATGAAAGCTTATTTTCTCCAAGACAATTAGTTGTATATTTTGTATATTTTGCAACATGCTATGGCTATTAT
ATGATTGTAACTTGGTTGCCGTCCTTTCTTGTAGCAGAAAAAGGATTTGCTCAAGGTTCAGTAGGATATGTAGCTGCACT
AGTTGCGGTCACTGCAGTGCCTGGTGCTTTGATATTTACTAAATATATAGACAAAAATGCACATTTGCGTCTGCGTTTAA
TTTTATTTTTATTAATTGCAGCAGCAGTAACAATTAGTTTGACAGTGTTTGCACCAAATCCTGCAGTACTGTATATTGCG
TTAATTTTATATGGCTTATTAGGTAAACTTGCGATTGATCCAGTTTTAATAACCTATGTATCTGATTCCGTATCAGGAGA
CAGAGTTGCCAGAGCATTAACTCTCTTTAACTTCTTTGGAATGAGTTCATCTGTTATTGCACCAACACTTACTGGTTATA
TTGGTGATGTAACCGGCTCGCGAGTATTAGCATTCTATATTGCAACCATTCTTCTTGCAGCAGCAGCGTTGCTATTTTTC
CTTGTGGTTATGTTAAGACAGAATAAAACAGCAGCTAACTAA

Upstream 100 bases:

>100_bases
CTTTTGTTTTTGTTGAAAGTGAACAATGTTATTGACTGGCTTACAACCTACAATTTAATTAAATAAAAAATAGATTAAAA
GAAGGGAGCGTTCTCATACC

Downstream 100 bases:

>100_bases
GAGAACTTCCAGTGGTGCTCCTTTGTATTCACAACGATATTTTCTCTGAAGCAAATAACGCCAAACGAATGCTCAGTGAT
GTATCAGGAGACTCTACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MEKTIKHDPNYYKKIIIALCLGWVAIWIYRTILTPIYPQIQESLGNISDTQIGLVASIYFFAYTGMQIPSGALVDKFGQK
KVLIPAFIVFALATFVIGTSSTIMQVYIGSLLAGISTGSYYGAAFSLSAKHTPKDKKSFSNAIINSGSALGMVIGLIGSS
VLVGGFEIQWNYMLFITAIVIVAVTFVFVLFIKQDKTSDKEVAEEKKDTVQSTDIQNESLFSPRQLVVYFVYFATCYGYY
MIVTWLPSFLVAEKGFAQGSVGYVAALVAVTAVPGALIFTKYIDKNAHLRLRLILFLLIAAAVTISLTVFAPNPAVLYIA
LILYGLLGKLAIDPVLITYVSDSVSGDRVARALTLFNFFGMSSSVIAPTLTGYIGDVTGSRVLAFYIATILLAAAALLFF
LVVMLRQNKTAAN

Sequences:

>Translated_413_residues
MEKTIKHDPNYYKKIIIALCLGWVAIWIYRTILTPIYPQIQESLGNISDTQIGLVASIYFFAYTGMQIPSGALVDKFGQK
KVLIPAFIVFALATFVIGTSSTIMQVYIGSLLAGISTGSYYGAAFSLSAKHTPKDKKSFSNAIINSGSALGMVIGLIGSS
VLVGGFEIQWNYMLFITAIVIVAVTFVFVLFIKQDKTSDKEVAEEKKDTVQSTDIQNESLFSPRQLVVYFVYFATCYGYY
MIVTWLPSFLVAEKGFAQGSVGYVAALVAVTAVPGALIFTKYIDKNAHLRLRLILFLLIAAAVTISLTVFAPNPAVLYIA
LILYGLLGKLAIDPVLITYVSDSVSGDRVARALTLFNFFGMSSSVIAPTLTGYIGDVTGSRVLAFYIATILLAAAALLFF
LVVMLRQNKTAAN
>Mature_413_residues
MEKTIKHDPNYYKKIIIALCLGWVAIWIYRTILTPIYPQIQESLGNISDTQIGLVASIYFFAYTGMQIPSGALVDKFGQK
KVLIPAFIVFALATFVIGTSSTIMQVYIGSLLAGISTGSYYGAAFSLSAKHTPKDKKSFSNAIINSGSALGMVIGLIGSS
VLVGGFEIQWNYMLFITAIVIVAVTFVFVLFIKQDKTSDKEVAEEKKDTVQSTDIQNESLFSPRQLVVYFVYFATCYGYY
MIVTWLPSFLVAEKGFAQGSVGYVAALVAVTAVPGALIFTKYIDKNAHLRLRLILFLLIAAAVTISLTVFAPNPAVLYIA
LILYGLLGKLAIDPVLITYVSDSVSGDRVARALTLFNFFGMSSSVIAPTLTGYIGDVTGSRVLAFYIATILLAAAALLFF
LVVMLRQNKTAAN

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789515, Length=392, Percent_Identity=25, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082071, Length=394, Percent_Identity=23.8578680203046, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789152, Length=387, Percent_Identity=20.9302325581395, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24654215, Length=230, Percent_Identity=23.0434782608696, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19922400, Length=230, Percent_Identity=23.0434782608696, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44898; Mature: 44898

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]