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The map label for this gene is ygaZ [H]

Identifier: 52784878

GI number: 52784878

Start: 1106560

End: 1107276

Strand: Direct

Name: ygaZ [H]

Synonym: BLi01106

Alternate gene names: 52784878

Gene position: 1106560-1107276 (Clockwise)

Preceding gene: 52784877

Following gene: 52784879

Centisome position: 26.21

GC content: 48.95

Gene sequence:

>717_bases
ATGGAAAAGCAGGATTCACTCAACTTTCTAGACGGGCTTCGTTCAGGGGTTTCCCTTGCCGTCGGCTACATCCCGGTCGC
CTTGACATTCGGGCTTTTGGCAAAAACAACGGGGCTGTCGCTTTTTGAAACGTTTTTGATGAGCGCCCTTGTTTTCGGAG
GAGCGTCCCAGTATATGTCTCTGAGCATGCTTGCCGTTCAGACAGGAATCATCGAAATCGTCATGACGACGTTCATTGTG
AACATCAGACATTTTTTATTTTCAGCGACTTTGAATCAATTGGTAGAAAAAGATTCGCCTTGGAAAAAAGCGTTTTACTC
ATTTTTCGCGGTGACAGATGAATCGTTTGCCGTCGCTGCTTTAAGAAAGGAAAAGCTGACGACCGGGTACATGATCGGCC
TCGGCTCGATCGGCTATGTAAGCTGGGTTTTTTGGAGTGCGGCCGGGCATTTTGCAGGAGCCGCCATGCCGGCTGTTCTT
CAGGAAAGCATGAGCATCGCCCTTTATGCCATGTTTATCGGATTGTTGGTGCCGCCTTTGAAAAAACAGCGCAAAGTCCT
GCTGCTGGCGGGAGCTGCCGCGCTATTCAATACGGTTTTCCAAATGAACGGAATGTTGTCGGCAGGATGGTCGATCGTCT
GCGCTACGCTTTTATCCGCCATCCTGATCGAATGGCTGTACCAATTTAGAACAGAGGGGAAGAGAAACTATGTTTAG

Upstream 100 bases:

>100_bases
AATGCATTTCACCGCAAACACCGTTCATACGTACAAAAACAACACGGAACAAACGGCATCATGCTATACACTCATTTATT
ATCCGTAAAGAGGTGTCAAG

Downstream 100 bases:

>100_bases
TCCGATCATCTGGATGATTATCGGCATGGCTGCCGTTACATATGTGCCGCGGATGTTGCCCCTCATTGCTTTTGAAAGCC
TGAAGCTTCCCGGATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MEKQDSLNFLDGLRSGVSLAVGYIPVALTFGLLAKTTGLSLFETFLMSALVFGGASQYMSLSMLAVQTGIIEIVMTTFIV
NIRHFLFSATLNQLVEKDSPWKKAFYSFFAVTDESFAVAALRKEKLTTGYMIGLGSIGYVSWVFWSAAGHFAGAAMPAVL
QESMSIALYAMFIGLLVPPLKKQRKVLLLAGAAALFNTVFQMNGMLSAGWSIVCATLLSAILIEWLYQFRTEGKRNYV

Sequences:

>Translated_238_residues
MEKQDSLNFLDGLRSGVSLAVGYIPVALTFGLLAKTTGLSLFETFLMSALVFGGASQYMSLSMLAVQTGIIEIVMTTFIV
NIRHFLFSATLNQLVEKDSPWKKAFYSFFAVTDESFAVAALRKEKLTTGYMIGLGSIGYVSWVFWSAAGHFAGAAMPAVL
QESMSIALYAMFIGLLVPPLKKQRKVLLLAGAAALFNTVFQMNGMLSAGWSIVCATLLSAILIEWLYQFRTEGKRNYV
>Mature_238_residues
MEKQDSLNFLDGLRSGVSLAVGYIPVALTFGLLAKTTGLSLFETFLMSALVFGGASQYMSLSMLAVQTGIIEIVMTTFIV
NIRHFLFSATLNQLVEKDSPWKKAFYSFFAVTDESFAVAALRKEKLTTGYMIGLGSIGYVSWVFWSAAGHFAGAAMPAVL
QESMSIALYAMFIGLLVPPLKKQRKVLLLAGAAALFNTVFQMNGMLSAGWSIVCATLLSAILIEWLYQFRTEGKRNYV

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=232, Percent_Identity=29.3103448275862, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26039; Mature: 26039

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQDSLNFLDGLRSGVSLAVGYIPVALTFGLLAKTTGLSLFETFLMSALVFGGASQYMS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LSMLAVQTGIIEIVMTTFIVNIRHFLFSATLNQLVEKDSPWKKAFYSFFAVTDESFAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHH
LRKEKLTTGYMIGLGSIGYVSWVFWSAAGHFAGAAMPAVLQESMSIALYAMFIGLLVPPL
HHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKQRKVLLLAGAAALFNTVFQMNGMLSAGWSIVCATLLSAILIEWLYQFRTEGKRNYV
HHCCEEEEEEHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEKQDSLNFLDGLRSGVSLAVGYIPVALTFGLLAKTTGLSLFETFLMSALVFGGASQYMS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LSMLAVQTGIIEIVMTTFIVNIRHFLFSATLNQLVEKDSPWKKAFYSFFAVTDESFAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHH
LRKEKLTTGYMIGLGSIGYVSWVFWSAAGHFAGAAMPAVLQESMSIALYAMFIGLLVPPL
HHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKQRKVLLLAGAAALFNTVFQMNGMLSAGWSIVCATLLSAILIEWLYQFRTEGKRNYV
HHCCEEEEEEHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]