| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yhdL [H]
Identifier: 52784791
GI number: 52784791
Start: 1022241
End: 1023311
Strand: Reverse
Name: yhdL [H]
Synonym: BLi01019
Alternate gene names: 52784791
Gene position: 1023311-1022241 (Counterclockwise)
Preceding gene: 52784792
Following gene: 52784790
Centisome position: 24.23
GC content: 43.04
Gene sequence:
>1071_bases ATGAATGAAGATTTTAAAAAACGTTGGGAAAAATATAAAAACGGCGAACTTTCCGAATCGGAAATGCTCCGGGTCGAAGA AGAGCTTGAACAGCTTGAAGAATACCAGGACATGCTGGAACAGGAAATGAAAGACGAAGACTGGGATTTGGCGATCAGTC CTGAAAAGCAAAAAGCGATTTTAAGATACGGAAAAAATAAATCATATATGCGGATCTCCACCCTTGCTGTTATTTCTACG CTTATTATTCTGCCGATCTGCACACTCGGCAGCTATCTATACTACGGGTTGGGCGGGCATGAAAGCAAAGGGAATGAACT GGTGCAAACCGCTTCAATGACAGTTGCCGTCACAAACCCGAATATTCAAGTCGATACTGAAGCCCTTGTCAACAAAGTAA AACTCTTTGGAATCGAAACACAGTTCCCGTTAAAGAAGCAAATCGGAAACGTCACAAAAGTAGTTGGAAATGAAGAAGTG GAAATGTTCTTCGATCAGCTGAAGTCTCCGCAGATTCATCAATACAATCAGGAGCTTTCAAAAGAAGAACGTCATTTTGT CTACCCTGACGGCATCAAAGAAAAATCAGTGTCCAAAGCCGAGTCGATTTTAAAACAGCTGCCTGACGGAACCGTAACCG AAGCTTTCCTTTCCTTTGAAAAAGCATACCCGACAAAGGAGCTGTATGAAAAATTAAAAGGCTATGATGTTCGCGTTCTG TGGAATGCGATTGAAACAGAGGGCGATTTAAAAGATCATCCATACGCAGAGCCGATCGGATTTCCCGGAAAAGATTCAAA CCGGATTTTTGAAATTCAGCAACCTGCCGAAAACGATGACGAACAGTTTAAAGCGGCGCTTTCCTACATGATCAAGAACA AGAAATGGGCTGAAACCATTTCAGGCAGGAAAGACCTGAAGCTTTCCAAACGGCTTGACTATGTGGAACAGAATGGTGTG AACGTGTATGGAGCCGTCATTACCGGACCGTCAAAAGAGGTTGAACGGCTGATCAAAAAAGGGCCTGTCAAAGCAGCTAA AGTAGGTGAGGTGGAATTATGGAACTGGTAA
Upstream 100 bases:
>100_bases GAAGCGTCAAGCTTGATGAATATCTCAGAGGCTAATTTTAAAAGTGTTTTATTTCGTGCCAGACAGCGGCTGAAAGCACT TTACAACAGAGGTGTTAACG
Downstream 100 bases:
>100_bases GAATCTTTAAGGAGCACAACGTATTTGGATGGGTGTCTGTCGGCACGGCCATTCTGTCCCTGTTCGTCTTAAACTTGGCC ATTTTAAGCGACACGATTGC
Product: YhdL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNEDFKKRWEKYKNGELSESEMLRVEEELEQLEEYQDMLEQEMKDEDWDLAISPEKQKAILRYGKNKSYMRISTLAVIST LIILPICTLGSYLYYGLGGHESKGNELVQTASMTVAVTNPNIQVDTEALVNKVKLFGIETQFPLKKQIGNVTKVVGNEEV EMFFDQLKSPQIHQYNQELSKEERHFVYPDGIKEKSVSKAESILKQLPDGTVTEAFLSFEKAYPTKELYEKLKGYDVRVL WNAIETEGDLKDHPYAEPIGFPGKDSNRIFEIQQPAENDDEQFKAALSYMIKNKKWAETISGRKDLKLSKRLDYVEQNGV NVYGAVITGPSKEVERLIKKGPVKAAKVGEVELWNW
Sequences:
>Translated_356_residues MNEDFKKRWEKYKNGELSESEMLRVEEELEQLEEYQDMLEQEMKDEDWDLAISPEKQKAILRYGKNKSYMRISTLAVIST LIILPICTLGSYLYYGLGGHESKGNELVQTASMTVAVTNPNIQVDTEALVNKVKLFGIETQFPLKKQIGNVTKVVGNEEV EMFFDQLKSPQIHQYNQELSKEERHFVYPDGIKEKSVSKAESILKQLPDGTVTEAFLSFEKAYPTKELYEKLKGYDVRVL WNAIETEGDLKDHPYAEPIGFPGKDSNRIFEIQQPAENDDEQFKAALSYMIKNKKWAETISGRKDLKLSKRLDYVEQNGV NVYGAVITGPSKEVERLIKKGPVKAAKVGEVELWNW >Mature_356_residues MNEDFKKRWEKYKNGELSESEMLRVEEELEQLEEYQDMLEQEMKDEDWDLAISPEKQKAILRYGKNKSYMRISTLAVIST LIILPICTLGSYLYYGLGGHESKGNELVQTASMTVAVTNPNIQVDTEALVNKVKLFGIETQFPLKKQIGNVTKVVGNEEV EMFFDQLKSPQIHQYNQELSKEERHFVYPDGIKEKSVSKAESILKQLPDGTVTEAFLSFEKAYPTKELYEKLKGYDVRVL WNAIETEGDLKDHPYAEPIGFPGKDSNRIFEIQQPAENDDEQFKAALSYMIKNKKWAETISGRKDLKLSKRLDYVEQNGV NVYGAVITGPSKEVERLIKKGPVKAAKVGEVELWNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40882; Mature: 40882
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDFKKRWEKYKNGELSESEMLRVEEELEQLEEYQDMLEQEMKDEDWDLAISPEKQKAI CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH LRYGKNKSYMRISTLAVISTLIILPICTLGSYLYYGLGGHESKGNELVQTASMTVAVTNP HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECC NIQVDTEALVNKVKLFGIETQFPLKKQIGNVTKVVGNEEVEMFFDQLKSPQIHQYNQELS CCEECHHHHHHHHHHEECCCCCCHHHHHCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH KEERHFVYPDGIKEKSVSKAESILKQLPDGTVTEAFLSFEKAYPTKELYEKLKGYDVRVL HCCCCEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEE WNAIETEGDLKDHPYAEPIGFPGKDSNRIFEIQQPAENDDEQFKAALSYMIKNKKWAETI EEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH SGRKDLKLSKRLDYVEQNGVNVYGAVITGPSKEVERLIKKGPVKAAKVGEVELWNW CCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEECCCEEECCC >Mature Secondary Structure MNEDFKKRWEKYKNGELSESEMLRVEEELEQLEEYQDMLEQEMKDEDWDLAISPEKQKAI CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH LRYGKNKSYMRISTLAVISTLIILPICTLGSYLYYGLGGHESKGNELVQTASMTVAVTNP HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECC NIQVDTEALVNKVKLFGIETQFPLKKQIGNVTKVVGNEEVEMFFDQLKSPQIHQYNQELS CCEECHHHHHHHHHHEECCCCCCHHHHHCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH KEERHFVYPDGIKEKSVSKAESILKQLPDGTVTEAFLSFEKAYPTKELYEKLKGYDVRVL HCCCCEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEE WNAIETEGDLKDHPYAEPIGFPGKDSNRIFEIQQPAENDDEQFKAALSYMIKNKKWAETI EEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH SGRKDLKLSKRLDYVEQNGVNVYGAVITGPSKEVERLIKKGPVKAAKVGEVELWNW CCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 10216858 [H]