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The map label for this gene is yvdJ [H]

Identifier: 52784464

GI number: 52784464

Start: 665474

End: 666355

Strand: Direct

Name: yvdJ [H]

Synonym: BLi00662

Alternate gene names: 52784464

Gene position: 665474-666355 (Clockwise)

Preceding gene: 52784463

Following gene: 52784465

Centisome position: 15.76

GC content: 49.66

Gene sequence:

>882_bases
ATGAACGACATGCGAAACGAAAAGCTGATCGTCCGATTTCTTAAAGCAGCGGCATCACCGGCGGGCGTCATGCGCTGCAA
ACATGCATTCAGCTGGCTCGAAATTTCTTTTCTGTTTATGTTTTTGACTGCTTGTTTAATGGCGCCTATGACCCTTGCGT
TTATGAAAATGGACCGCTTCAATGCCGGGTATCTGATCCCGAACGTCGCTCAAGAGGCTGACGCGGCATTCATCAAACAA
TTAAAAGGCTACCAATTGACAAACGGAAGATTGAAGGGCGAAGACGAGCTGTACCGTGTGGAGAAAGGGAGAACCCTGCT
GGCCGTCGATTTGAAGGATGAATTAAAAACAAGCGGTGAGAACGGGCGGATAAAAGCGGAAGGCTATCAAAATGCGCTCA
TCTTTCAGTCAGATCATCTGATCATCAGTGATCAAAGCGGAGCGGGGTTTTCCGTTCGCTATCCGGCAAAGGCTGGGCTG
AATGATCTGGATGCCGGTCATTTGGGGGATTTTATCGGTGCAATGTGGTTTGCCCAATATAAGCCGCTTATCATCATGCT
GGCCTGTTCGGCGGTTTTCATCATCTCGCTTTTTTTAACGGCCGTTCTGGCGGGAGGCATCTGGATCTCCAAAAAATCCA
ACATGACCGGGATAAGGTCGTTTAAGGAAGCGGCCGCAGCGGCGGTGTGCGGATCGGCGCTTCCGGCAGGAGCCGCAATG
GCTTTCGGTATGATCAGCTTTGACTTCATCGCGATGCTGCTCATCCATTCGTGCGGTAGTGCTTTGATGGTCTCTTTCAT
TTTCAGGCACATCTTCAAGAACCGCCATCACAACGAAAATCTACAGTCAGGAGGAAATCATGGCAAATCAGCGGCTATTT
GA

Upstream 100 bases:

>100_bases
GGGGCGATTCTTGCAGCTCTGCCGATTTGCATCTTGTTCTTCTTTCTCCAAAAGAACTTTGTGTCCGGTTTGACATCCGG
CGGAACGAAGGGATAAATCG

Downstream 100 bases:

>100_bases
GATCGACCAGTGGAAAATCAAAACAAACAAATTTGAAAAGGAACATAAACGGCTTCAGGAAAGTCTGACATCCTTGGCGA
ACGGATATATGGGAATCAGG

Product: YvdJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPMTLAFMKMDRFNAGYLIPNVAQEADAAFIKQ
LKGYQLTNGRLKGEDELYRVEKGRTLLAVDLKDELKTSGENGRIKAEGYQNALIFQSDHLIISDQSGAGFSVRYPAKAGL
NDLDAGHLGDFIGAMWFAQYKPLIIMLACSAVFIISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAM
AFGMISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI

Sequences:

>Translated_293_residues
MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPMTLAFMKMDRFNAGYLIPNVAQEADAAFIKQ
LKGYQLTNGRLKGEDELYRVEKGRTLLAVDLKDELKTSGENGRIKAEGYQNALIFQSDHLIISDQSGAGFSVRYPAKAGL
NDLDAGHLGDFIGAMWFAQYKPLIIMLACSAVFIISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAM
AFGMISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI
>Mature_293_residues
MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPMTLAFMKMDRFNAGYLIPNVAQEADAAFIKQ
LKGYQLTNGRLKGEDELYRVEKGRTLLAVDLKDELKTSGENGRIKAEGYQNALIFQSDHLIISDQSGAGFSVRYPAKAGL
NDLDAGHLGDFIGAMWFAQYKPLIIMLACSAVFIISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAM
AFGMISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI

Specific function: Could have a role in maltodextrin utilization [H]

COG id: COG5521

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009574 [H]

Pfam domain/function: PF06691 DUF1189 [H]

EC number: NA

Molecular weight: Translated: 32009; Mature: 32009

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPMTLAFMKMDRF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAGYLIPNVAQEADAAFIKQLKGYQLTNGRLKGEDELYRVEKGRTLLAVDLKDELKTSGE
CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHEECCCCEEEEEECHHHHHCCCC
NGRIKAEGYQNALIFQSDHLIISDQSGAGFSVRYPAKAGLNDLDAGHLGDFIGAMWFAQY
CCEEEECCCCCEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
KPLIIMLACSAVFIISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAM
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AFGMISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPMTLAFMKMDRF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAGYLIPNVAQEADAAFIKQLKGYQLTNGRLKGEDELYRVEKGRTLLAVDLKDELKTSGE
CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHEECCCCEEEEEECHHHHHCCCC
NGRIKAEGYQNALIFQSDHLIISDQSGAGFSVRYPAKAGLNDLDAGHLGDFIGAMWFAQY
CCEEEECCCCCEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
KPLIIMLACSAVFIISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAM
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AFGMISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]