Click here to switch to the map view.

The map label for this gene is yvdI [H]

Identifier: 52784463

GI number: 52784463

Start: 664618

End: 665469

Strand: Direct

Name: yvdI [H]

Synonym: BLi00661

Alternate gene names: 52784463

Gene position: 664618-665469 (Clockwise)

Preceding gene: 52784462

Following gene: 52784464

Centisome position: 15.74

GC content: 50.59

Gene sequence:

>852_bases
ATGAGAGGGCTTTTTAAAAATACGCGGTTCACCGGGATGCTGAACAAGGTTTTGACCTATATATTTTTGGCGTTTTTAAG
CATCGTGATTATTTATCCGCTTTTGATCACAGCATCATCCGCATTCCGGGTCGGGAATGTAGCGGCTTTTACACTCGATT
TTTCGGGCGCATGGACATTGGACCACTTTAAGCGGCTGTTTGAAGAGACGCTTTACCTCAATTGGTACGGGAATACACTT
GTGATCGCTCTGTCTGTCATGGTGTTCCAGGTGACGATTGTGACGCTTGCCGGCTATACGTACAGCCGCTACCGGTTTGC
GGGCCGAAAAAAGAGCCTCATTTTCTTTTTGATCATTCAAATGGTGCCGACGATGGCGGCGCTGACCGCTTTTTACGTCC
TGGCCATGCTGATCGGAGCTTTGGACCAATATTGGTTTTTAACTGCAATCTATATCGGCGGCGGAATTCCGATGAACACA
TGGCTGATGAAGGGCTACTTTGATACAGTGCCGAGAGAAATCGATGAAGCGGCGCGAATTGATGGAGCGGGGCACCTGCG
GATCTTTGCTTCGGTCGTTCTCCCGCTTGTGAAACCGATGCTTGCAGTCCAGGCGCTGTGGGCGTTTATGGGGCCGTTCG
GCGACTATCTGCTGGCGAAATTTCTGCTTCGGTCGCCGGAAAGCCTGACCATCGCCGTCGGTTTGCAGACATTCATCTCC
AATCCGCAGCAGCAAAAAGTCGCGCTGTTTGCAGCTGGGGCGATTCTTGCAGCTCTGCCGATTTGCATCTTGTTCTTCTT
TCTCCAAAAGAACTTTGTGTCCGGTTTGACATCCGGCGGAACGAAGGGATAA

Upstream 100 bases:

>100_bases
GGCGGCTGCTGTCACACTGCTCATTTCTTTCATTGTCATCGGGGTTTCCCTGATTGCTTTTAAGAAATCGAATGCCTTTG
GCAATGAGGAGGTCATGTAG

Downstream 100 bases:

>100_bases
ATCGATGAACGACATGCGAAACGAAAAGCTGATCGTCCGATTTCTTAAAGCAGCGGCATCACCGGCGGGCGTCATGCGCT
GCAAACATGCATTCAGCTGG

Product: YvdI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAFTLDFSGAWTLDHFKRLFEETLYLNWYGNTL
VIALSVMVFQVTIVTLAGYTYSRYRFAGRKKSLIFFLIIQMVPTMAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNT
WLMKGYFDTVPREIDEAARIDGAGHLRIFASVVLPLVKPMLAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFIS
NPQQQKVALFAAGAILAALPICILFFFLQKNFVSGLTSGGTKG

Sequences:

>Translated_283_residues
MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAFTLDFSGAWTLDHFKRLFEETLYLNWYGNTL
VIALSVMVFQVTIVTLAGYTYSRYRFAGRKKSLIFFLIIQMVPTMAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNT
WLMKGYFDTVPREIDEAARIDGAGHLRIFASVVLPLVKPMLAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFIS
NPQQQKVALFAAGAILAALPICILFFFLQKNFVSGLTSGGTKG
>Mature_283_residues
MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAFTLDFSGAWTLDHFKRLFEETLYLNWYGNTL
VIALSVMVFQVTIVTLAGYTYSRYRFAGRKKSLIFFLIIQMVPTMAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNT
WLMKGYFDTVPREIDEAARIDGAGHLRIFASVVLPLVKPMLAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFIS
NPQQQKVALFAAGAILAALPICILFFFLQKNFVSGLTSGGTKG

Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=34.4322344322344, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=29.0909090909091, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789860, Length=203, Percent_Identity=25.615763546798, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31481; Mature: 31481

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAFTLDFSGAWTL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEEEEECCCCCCH
DHFKRLFEETLYLNWYGNTLVIALSVMVFQVTIVTLAGYTYSRYRFAGRKKSLIFFLIIQ
HHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHH
MVPTMAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNTWLMKGYFDTVPREIDEAARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DGAGHLRIFASVVLPLVKPMLAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHC
NPQQQKVALFAAGAILAALPICILFFFLQKNFVSGLTSGGTKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAFTLDFSGAWTL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEEEEECCCCCCH
DHFKRLFEETLYLNWYGNTLVIALSVMVFQVTIVTLAGYTYSRYRFAGRKKSLIFFLIIQ
HHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHH
MVPTMAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNTWLMKGYFDTVPREIDEAARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DGAGHLRIFASVVLPLVKPMLAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHC
NPQQQKVALFAAGAILAALPICILFFFLQKNFVSGLTSGGTKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]