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The map label for this gene is yrhM [H]

Identifier: 52784409

GI number: 52784409

Start: 593209

End: 594069

Strand: Direct

Name: yrhM [H]

Synonym: BLi00596

Alternate gene names: 52784409

Gene position: 593209-594069 (Clockwise)

Preceding gene: 52784408

Following gene: 52784410

Centisome position: 14.05

GC content: 46.46

Gene sequence:

>861_bases
ATGGATAAGAAATTGGAACAGCTGAGAAAAGCATATCAAAACGTCCCCATTCCGAAGGAGCTGGATCAGGTTGTCGAGAC
TGCGCTTCAGCATAAACCGAAGAAGAAGAGAAGGATAGTGGTATGGCCCGCATCAACGCTGGTCGCGGCGGCTGTACTAT
TGGCTGCCGTCGTGAATATCAATCCCGGAGCAGCGCAGGCCATGTCGCAGATACCTGTCATCGGCAAGGTCGTTAAAGCC
ATCACATTCACCGAGATCAAACAGAAAGATGGAGAATCGAGCATTGACGTGAAAACACCGGCTCTTTCCGGCTTGAATAA
CCGGGAGCTCGAAAATGGCATCAACGAGAAATATGTAAAGGAAAGCCATCAGCTTTACCGGGAATTCATGAAGGAGACGT
CCCGGAATAAAAAAGGGCATCTCAGCATCTACAGCGATTATGAGACAGTCACGGATACGAAAGATTTGATTTCGATTCGG
CGAAGCGTCGAAAGAACGGAAGCGTCCAGCTATACCGAACGGCGCTATATCACCATTGACAAAAAGAATGAAGTCCTGCT
CACCTTGAAAAGCTTGTTTAAAGACGACCGGTATATCACCGCCATCAGCGAAAACATTAAAGAGCAAATGAAACAGCAAA
TGAAAGATGATCCTGATAAAATATATTGGATCGGTGACGAAGAAGTCGAGCCATTCAAACGAATCAAGGCCGACCAAAAT
TTTTACATTACAGAGAATCATAAACTGGTGATTTCGTTTGATGATTATGAAGTCGCTCCCGGCTATATGGGCGCGGTGGA
GTTTGAAATTCCGACTAAGGCGATTTCGAACCTGCTGATCGGCGACCGCTATATCCGCTAG

Upstream 100 bases:

>100_bases
TAGCGGAAATCACAGGCGAAAACTTGAATACGATCAAAACGCGCCTTTACAGAGGATTGAAGCTTATGCGCATCCAATTG
ACGAAGGAGGATCTTTCTTA

Downstream 100 bases:

>100_bases
TGAAAGAAATCCATGATTCGCTGAAATCATGGATTTCTTATTTTTTACAACTTTGTAACAACATATTCTGCAGGAAACTC
TTATACTAGAGAGACGGCAT

Product: YrhM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAAAVLLAAVVNINPGAAQAMSQIPVIGKVVKA
ITFTEIKQKDGESSIDVKTPALSGLNNRELENGINEKYVKESHQLYREFMKETSRNKKGHLSIYSDYETVTDTKDLISIR
RSVERTEASSYTERRYITIDKKNEVLLTLKSLFKDDRYITAISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQN
FYITENHKLVISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR

Sequences:

>Translated_286_residues
MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAAAVLLAAVVNINPGAAQAMSQIPVIGKVVKA
ITFTEIKQKDGESSIDVKTPALSGLNNRELENGINEKYVKESHQLYREFMKETSRNKKGHLSIYSDYETVTDTKDLISIR
RSVERTEASSYTERRYITIDKKNEVLLTLKSLFKDDRYITAISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQN
FYITENHKLVISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR
>Mature_286_residues
MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAAAVLLAAVVNINPGAAQAMSQIPVIGKVVKA
ITFTEIKQKDGESSIDVKTPALSGLNNRELENGINEKYVKESHQLYREFMKETSRNKKGHLSIYSDYETVTDTKDLISIR
RSVERTEASSYTERRYITIDKKNEVLLTLKSLFKDDRYITAISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQN
FYITENHKLVISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR

Specific function: Anti-sigma factor for sigV. Negatively regulates sigV activity through direct interaction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729 [H]

Pfam domain/function: PF11738 DUF3298 [H]

EC number: NA

Molecular weight: Translated: 32889; Mature: 32889

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAAAVLLAAVVNI
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCC
NPGAAQAMSQIPVIGKVVKAITFTEIKQKDGESSIDVKTPALSGLNNRELENGINEKYVK
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCHHHHHCCCHHHHHH
ESHQLYREFMKETSRNKKGHLSIYSDYETVTDTKDLISIRRSVERTEASSYTERRYITID
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
KKNEVLLTLKSLFKDDRYITAISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQN
CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCC
FYITENHKLVISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR
EEEECCCEEEEEECCCEECCCCCCEEEEECCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAAAVLLAAVVNI
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCC
NPGAAQAMSQIPVIGKVVKAITFTEIKQKDGESSIDVKTPALSGLNNRELENGINEKYVK
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCHHHHHCCCHHHHHH
ESHQLYREFMKETSRNKKGHLSIYSDYETVTDTKDLISIRRSVERTEASSYTERRYITID
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
KKNEVLLTLKSLFKDDRYITAISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQN
CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCC
FYITENHKLVISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR
EEEECCCEEEEEECCCEECCCCCCEEEEECCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]