| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ydbR [H]
Identifier: 52784366
GI number: 52784366
Start: 552257
End: 553720
Strand: Direct
Name: ydbR [H]
Synonym: BLi00546
Alternate gene names: 52784366
Gene position: 552257-553720 (Clockwise)
Preceding gene: 52784365
Following gene: 52784367
Centisome position: 13.08
GC content: 48.09
Gene sequence:
>1464_bases TTGACAATAACGTTTCAAGATTTTCAATTAAGTTCTGATCTCACAAAAGCAATCAAGCGTATGGGATTTGAAGAGGCAAC ACCGATTCAGGCACAAACGATTCCACTCGGCCTTGCAAATAAAGATGTGATCGGACAAGCGCAAACGGGAACAGGAAAAA CGGCTGCATTTGGCATCCCCCTTGTTGAGAAAATCAACCCCGAGTCTCCTAACATTCAAGCCATTGTTATCGCACCTACT CGTGAACTAGCCATTCAAGTTTCTGAAGAGCTATATAAAATTGGACAGGATAAACGCGCTCGCGTGCTGCCGATTTACGG AGGACAGGATATCGGACGCCAGATTCGCGCGCTTAAGAAAAACCCTCATATTATCGTCGGCACACCTGGTCGTCTGCTTG ACCATATCAACCGCCGCACAATGCGTCTTCAAACAGTGAACACCGTTGTGCTTGATGAAGCGGATGAAATGCTGAACATG GGATTCATCGAAGATATCGAATCCATCCTTTCCAATGTGCCTGCTGAACACCAGACATTGCTGTTTTCTGCAACAATGCC TGCTCCGATTAAGCGGATTGCAGAACGTTTCATGACCAACCCGGAGCACGTAAAAGTGAAAGCAAAAGAAATGACAGTAT CAAACATCCAGCAGTTCTACCTAGAAGTTCATGAACGCAAAAAGTTTGATACGCTGACACGCCTTCTTGACATCCAGTCT CCGGAATTGGCGATCGTATTCGGCCGGACAAAGCGCCGTGTCGATGAACTGACAGAAGCGCTTAATCTGCGCGGGTATAC AGCTGAAGGAATTCACGGAGATTTGACCCAGGCGAAGCGGATGGTTGCACTCCGGAAATTTAAGCAAGGCGCGATTGAAG TGCTCGTTGCGACAGACGTTGCGGCTCGCGGCCTTGATATTTCAGGTGTAACGCACGTCTACAACTTCGATGTGCCGCAA GATCCTGAGAGCTATGTTCACCGCATCGGAAGAACGGGACGCGCGGGCAAAACAGGAATGGCGATGACCTTCATTACACC GCGTGAAAAGGATATGCTGCGCGCCATCGAGCAGACGACAAAACGCAAAATGGACCGCATGAAAGCACCGACTCTCGATG AGGCCATTGAAGGACAGCAGCAGGTGACGGTTGACCGCATCCGGACGATCATCGAGGAAAATAACCTGAACTTCTATATG ACGGCTGCAGCGGAATTATTGGAAGACCATGATTCTGTGACAGTTGTTGCGGCTGCCATTAAAATGATGACTAAAGAGCC GGACAACACACCTGTCCGTTTGACGGAAGAGGCTCCGCTCAGAACGAAGCGAAACAAAAATCACCACCACCGTTCATCAA AACGCAGAGACGGCGGCGGCTACAGAGGAAAGAACAATCGTTCATCTTATGATAAAAAGCGTTCTTCGAATGACAGACGC CAAAAAAAATCATATAATTCATAA
Upstream 100 bases:
>100_bases TCGGGCTTTGCATAAGTATGGACCTGTCCTTTGCACAAAGGGCAGTTTTTATTGATAAAACACGATTACTGAAACAGTAA GCAGAAGGAGTTTGAATACA
Downstream 100 bases:
>100_bases TCAAAAGGCGGATCCTTTTTTACGGATTCGCCTTTTTTTAAAAACTAAAGCCTTTAAACGAAACATTTTCAGACCGAAGA CCGTAAATAGAATGAGATTG
Product: YdbR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPT RELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNM GFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQ DPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYM TAAAELLEDHDSVTVVAAAIKMMTKEPDNTPVRLTEEAPLRTKRNKNHHHRSSKRRDGGGYRGKNNRSSYDKKRSSNDRR QKKSYNS
Sequences:
>Translated_487_residues MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPT RELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNM GFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQ DPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYM TAAAELLEDHDSVTVVAAAIKMMTKEPDNTPVRLTEEAPLRTKRNKNHHHRSSKRRDGGGYRGKNNRSSYDKKRSSNDRR QKKSYNS >Mature_486_residues TITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTR ELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMG FIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSP ELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQD PESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYMT AAAELLEDHDSVTVVAAAIKMMTKEPDNTPVRLTEEAPLRTKRNKNHHHRSSKRRDGGGYRGKNNRSSYDKKRSSNDRRQ KKSYNS
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=40.7608695652174, Blast_Score=301, Evalue=1e-81, Organism=Homo sapiens, GI20149629, Length=376, Percent_Identity=38.031914893617, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=40.1639344262295, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=40, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=40.2816901408451, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI164664518, Length=355, Percent_Identity=36.056338028169, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=38.7978142076503, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13129006, Length=427, Percent_Identity=35.1288056206089, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=39.7877984084881, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=39.7877984084881, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI87196351, Length=377, Percent_Identity=39.7877984084881, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI222352149, Length=354, Percent_Identity=41.8079096045198, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=36.3171355498721, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI169881239, Length=375, Percent_Identity=40.2666666666667, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI13514809, Length=375, Percent_Identity=40.2666666666667, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI50659095, Length=427, Percent_Identity=36.0655737704918, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=37.7717391304348, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=37.7717391304348, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI38201710, Length=390, Percent_Identity=37.1794871794872, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=38.8101983002833, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI31542656, Length=476, Percent_Identity=33.1932773109244, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=39.2156862745098, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=39.2156862745098, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=39.2156862745098, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=39.2156862745098, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI41327776, Length=376, Percent_Identity=35.1063829787234, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=36.986301369863, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=35.2601156069364, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI41327773, Length=361, Percent_Identity=38.781163434903, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=37.883008356546, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI55749865, Length=360, Percent_Identity=37.7777777777778, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=37.1900826446281, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=33.5260115606936, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=33.5260115606936, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI51094101, Length=349, Percent_Identity=35.8166189111748, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI164419743, Length=349, Percent_Identity=35.8166189111748, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI256223453, Length=402, Percent_Identity=32.5870646766169, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI164419732, Length=385, Percent_Identity=35.5844155844156, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=35.2785145888594, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=31.5926892950392, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=31.331592689295, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=32.2404371584699, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI38327634, Length=376, Percent_Identity=33.7765957446808, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=33.0555555555556, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=33.2409972299169, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=31.6860465116279, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=29.1044776119403, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=27.8846153846154, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI9966805, Length=335, Percent_Identity=30.1492537313433, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI4826686, Length=347, Percent_Identity=29.6829971181556, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI256773275, Length=398, Percent_Identity=26.1306532663317, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=32.5688073394495, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI154759257, Length=89, Percent_Identity=44.9438202247191, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI87082221, Length=447, Percent_Identity=42.7293064876958, Blast_Score=366, Evalue=1e-102, Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=43.5028248587571, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=40.6417112299465, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1790214, Length=364, Percent_Identity=38.7362637362637, Blast_Score=257, Evalue=1e-69, Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=37.597911227154, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI48994977, Length=346, Percent_Identity=23.9884393063584, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=39.622641509434, Blast_Score=305, Evalue=4e-83, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=40.5479452054795, Blast_Score=297, Evalue=8e-81, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=40.2739726027397, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17555296, Length=390, Percent_Identity=37.6923076923077, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=35.2617079889807, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=36.5079365079365, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17510307, Length=375, Percent_Identity=38.1333333333333, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510309, Length=375, Percent_Identity=38.1333333333333, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI86570094, Length=370, Percent_Identity=37.027027027027, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71995514, Length=375, Percent_Identity=38.1333333333333, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI115532546, Length=374, Percent_Identity=34.4919786096257, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=34.4827586206897, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI115533224, Length=351, Percent_Identity=38.1766381766382, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=37.6, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=33.1550802139037, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17507945, Length=347, Percent_Identity=39.4812680115274, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17510559, Length=412, Percent_Identity=32.7669902912621, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=33.8150289017341, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=35.792349726776, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=34.6704871060172, Blast_Score=217, Evalue=9e-57, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=34.6704871060172, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17552642, Length=386, Percent_Identity=33.9378238341969, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.9462365591398, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=36.1185983827493, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=33.4158415841584, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=33.4158415841584, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=35.0404312668464, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=33.4158415841584, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17553716, Length=366, Percent_Identity=32.5136612021858, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=33.7988826815642, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=30.2325581395349, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=29.0167865707434, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI193208216, Length=403, Percent_Identity=30.7692307692308, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.3571428571429, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=29.0697674418605, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=30.1333333333333, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=27.5132275132275, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=31.2, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI25148291, Length=361, Percent_Identity=27.1468144044321, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=33.6683417085427, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI25148205, Length=351, Percent_Identity=26.2108262108262, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=38.8888888888889, Blast_Score=99, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=39.6694214876033, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6320041, Length=373, Percent_Identity=37.5335120643432, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=39.6648044692737, Blast_Score=265, Evalue=9e-72, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=37.027027027027, Blast_Score=263, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=39.2857142857143, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6325138, Length=373, Percent_Identity=39.6782841823056, Blast_Score=256, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6322912, Length=364, Percent_Identity=37.3626373626374, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6322323, Length=364, Percent_Identity=37.3626373626374, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=40.8333333333333, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=405, Percent_Identity=34.5679012345679, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=35.9673024523161, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=33.7047353760446, Blast_Score=226, Evalue=8e-60, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=34.0659340659341, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=35.0132625994695, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=369, Percent_Identity=35.5013550135501, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=34.1397849462366, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=394, Percent_Identity=32.741116751269, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=406, Percent_Identity=29.8029556650246, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=31.6301703163017, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=561, Percent_Identity=29.2335115864528, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=397, Percent_Identity=33.2493702770781, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=419, Percent_Identity=30.5489260143198, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=37.7272727272727, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6324366, Length=347, Percent_Identity=26.8011527377522, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=26.046511627907, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=396, Percent_Identity=25.7575757575758, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323844, Length=371, Percent_Identity=23.1805929919137, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=40, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24584399, Length=380, Percent_Identity=39.7368421052632, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=39.010989010989, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI28574962, Length=385, Percent_Identity=38.7012987012987, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24585582, Length=381, Percent_Identity=36.2204724409449, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=38.8586956521739, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=38.2920110192837, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=40.1595744680851, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI21356161, Length=373, Percent_Identity=39.142091152815, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24583279, Length=354, Percent_Identity=35.5932203389831, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24583281, Length=354, Percent_Identity=35.5932203389831, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=35.8056265984655, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI18857967, Length=372, Percent_Identity=36.5591397849462, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=36.4902506963788, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI17136814, Length=371, Percent_Identity=37.1967654986523, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=36.0335195530726, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=34.2939481268012, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=34.2939481268012, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=34.2939481268012, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI28575014, Length=346, Percent_Identity=33.8150289017341, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=38.2165605095541, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=38.0821917808219, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=34.9431818181818, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=34.9431818181818, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI17647335, Length=357, Percent_Identity=31.0924369747899, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24642822, Length=380, Percent_Identity=32.6315789473684, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571338, Length=427, Percent_Identity=29.7423887587822, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI18859659, Length=427, Percent_Identity=29.7423887587822, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24666101, Length=362, Percent_Identity=32.0441988950276, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24643725, Length=416, Percent_Identity=28.8461538461538, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI20130173, Length=463, Percent_Identity=27.4298056155508, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=31.7220543806647, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=28.6486486486486, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=25.2955082742317, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=24.1477272727273, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54918; Mature: 54787
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIP CEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCC LVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKK HHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHC NPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTL CCCEEEECCHHHHHHHHHHHEEEEHHHEEEECCHHHHHHCHHHHHHHHHHHHCCCCHHEE LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS EEECCCCHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEHH AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTT HHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH KRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYMTAAAELLEDHDSVTVVAAAI HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHH KMMTKEPDNTPVRLTEEAPLRTKRNKNHHHRSSKRRDGGGYRGKNNRSSYDKKRSSNDRR HHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHH QKKSYNS HHHCCCC >Mature Secondary Structure TITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIP EEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCC LVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKK HHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHC NPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTL CCCEEEECCHHHHHHHHHHHEEEEHHHEEEECCHHHHHHCHHHHHHHHHHHHCCCCHHEE LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS EEECCCCHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEHH AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTT HHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH KRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYMTAAAELLEDHDSVTVVAAAI HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHH KMMTKEPDNTPVRLTEEAPLRTKRNKNHHHRSSKRRDGGGYRGKNNRSSYDKKRSSNDRR HHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHH QKKSYNS HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]