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The map label for this gene is gbpA [H]

Identifier: 52784341

GI number: 52784341

Start: 529122

End: 529802

Strand: Direct

Name: gbpA [H]

Synonym: BLi00521

Alternate gene names: 52784341

Gene position: 529122-529802 (Clockwise)

Preceding gene: 52784340

Following gene: 52784349

Centisome position: 12.53

GC content: 48.75

Gene sequence:

>681_bases
ATGGCCGCGTATGTTTTCTTTTTGCATCAAAACCCGTCTCAACACTGTGAAAAGAGAGGGGATTGTAACGTGTATCGTTT
GCCAAAAACCACCTTCAGCACCGTTTTCATATTAGCAGCCGGATTGCTGTGGATGTCCATCGTTCCTCAGCAGGCCTTCG
CTCATGGTTTTATCGAAAAACCGGGGAGCAGAGCGGCTCTGTGCAGTGAGGCTTTCGGATTTCTCAATCTGAATTGTGGA
AGCGTGATGTATGAGCCGCAAAGCCTGGAAGCGAAAAAAGGGTTTCCGCATAGCGGCCCGGCAGATGGACAAATTGCATC
CGCAGGCGGGCTGTTCGGCGGAATTCTTGATCAGCAGTCGGAAAATCGCTGGTTTAAACATATCATGACCGGCGGAGAAC
ACACCTTTACCTGGACATATACCGCCCCCCACAATACGAGCCAATGGCACTACTATATCACCAAAAAAGGCTGGGATCCT
GACAAACCGCTTAAGCGCGCAGACTTTGAACTGATTGGCGCCGTTCCGCATGACGGTTCCCCTGCATCTCGCAATTTATC
TCACCACATTTATATTCCTGAAGACCGCCTCGGGTATCATGTCATACTTGCCGTTTGGGATGTGGCTGATACTGAAAACG
CTTTCTATCAAGTGATTGATGTTGATCTAGTGAACAAATAA

Upstream 100 bases:

>100_bases
TGAAAAAAAGTTTAAAAAGGATTTTTTAGTATGATGCCAAGGGAGATCGTCCCTTGGCTTTATAACGGTCAGATGTTAAA
ATTGAATGGGTAATATTGGA

Downstream 100 bases:

>100_bases
AGCCTGGACTTTTCTTGATCTGTTTGGAAAACCGATTTGTGAATCAGCGGGTTTTGGTGCAAACAGAGAAAATAAGCGAT
CAAAAACCCCGGCTCTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAAYVFFLHQNPSQHCEKRGDCNVYRLPKTTFSTVFILAAGLLWMSIVPQQAFAHGFIEKPGSRAALCSEAFGFLNLNCG
SVMYEPQSLEAKKGFPHSGPADGQIASAGGLFGGILDQQSENRWFKHIMTGGEHTFTWTYTAPHNTSQWHYYITKKGWDP
DKPLKRADFELIGAVPHDGSPASRNLSHHIYIPEDRLGYHVILAVWDVADTENAFYQVIDVDLVNK

Sequences:

>Translated_226_residues
MAAYVFFLHQNPSQHCEKRGDCNVYRLPKTTFSTVFILAAGLLWMSIVPQQAFAHGFIEKPGSRAALCSEAFGFLNLNCG
SVMYEPQSLEAKKGFPHSGPADGQIASAGGLFGGILDQQSENRWFKHIMTGGEHTFTWTYTAPHNTSQWHYYITKKGWDP
DKPLKRADFELIGAVPHDGSPASRNLSHHIYIPEDRLGYHVILAVWDVADTENAFYQVIDVDLVNK
>Mature_225_residues
AAYVFFLHQNPSQHCEKRGDCNVYRLPKTTFSTVFILAAGLLWMSIVPQQAFAHGFIEKPGSRAALCSEAFGFLNLNCGS
VMYEPQSLEAKKGFPHSGPADGQIASAGGLFGGILDQQSENRWFKHIMTGGEHTFTWTYTAPHNTSQWHYYITKKGWDPD
KPLKRADFELIGAVPHDGSPASRNLSHHIYIPEDRLGYHVILAVWDVADTENAFYQVIDVDLVNK

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 25302; Mature: 25171

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYVFFLHQNPSQHCEKRGDCNVYRLPKTTFSTVFILAAGLLWMSIVPQQAFAHGFIEK
CCEEEEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PGSRAALCSEAFGFLNLNCGSVMYEPQSLEAKKGFPHSGPADGQIASAGGLFGGILDQQS
CCCCHHHHHHCCCEEEECCCCEEECCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHCCCC
ENRWFKHIMTGGEHTFTWTYTAPHNTSQWHYYITKKGWDPDKPLKRADFELIGAVPHDGS
CHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHCCEEEEEECCCCCC
PASRNLSHHIYIPEDRLGYHVILAVWDVADTENAFYQVIDVDLVNK
CCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
AAYVFFLHQNPSQHCEKRGDCNVYRLPKTTFSTVFILAAGLLWMSIVPQQAFAHGFIEK
CEEEEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PGSRAALCSEAFGFLNLNCGSVMYEPQSLEAKKGFPHSGPADGQIASAGGLFGGILDQQS
CCCCHHHHHHCCCEEEECCCCEEECCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHCCCC
ENRWFKHIMTGGEHTFTWTYTAPHNTSQWHYYITKKGWDPDKPLKRADFELIGAVPHDGS
CHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHCCEEEEEECCCCCC
PASRNLSHHIYIPEDRLGYHVILAVWDVADTENAFYQVIDVDLVNK
CCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]