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The map label for this gene is ycsK

Identifier: 52784324

GI number: 52784324

Start: 510005

End: 510643

Strand: Direct

Name: ycsK

Synonym: BLi00504

Alternate gene names: 52784324

Gene position: 510005-510643 (Clockwise)

Preceding gene: 52784323

Following gene: 52784325

Centisome position: 12.08

GC content: 46.01

Gene sequence:

>639_bases
ATGACGCTTCAATATACGGCTCTCGGCGACTCTTTAACCGTCGGGGTCGGTGCAGGTTTGTTTGAGCCGGGATTTGTACA
GCGCTATAAAAGGAAAATGGAAGAGGATTTGAACGAAGAAGTTTCTTTGATTGTATTTGCGAAATCCGGTCTTGAGACGT
CGGAAATTTTAGCGATGCTGAACGAGCCTTTCATCATGGAACAGGTCAAAAAAGCGGACGTCATCACGATAACGGGCTGC
GGAAATGATCTTCTGCAATCGCTGGAGATATATGAAAAAGAAAAGGATGAACACGTCTTTTTGGAAGCTTCCTCCCACTG
TCAGAAAAACTACTCAGGCATGCTTGAGAAGATCAGAGAAATAAAGGGAGAAAAAGATACGCGTTATCTCGTCCGGCTTC
TCAATTTATACAACCCATTTCCGTCAATCGAATTAGCGGACAAATGGATTTCCGGCTTTAACAGGCACTTAAAGCAGCTA
GAGTCCGCTCCGCAAATCAAGGTGATCGATACTTATGCTGTCTTTAAAGGACGCGAAAAAGAATATTTGTCAATTGACCG
TGTGCATCCAAGCAGCAGAGGGTATGAAGCGATGTCGGAAAAGCTGAGAGCGGCGGGCTACGGGCGGCTGGAGGGCTGA

Upstream 100 bases:

>100_bases
TTAGGTTTTTAGGAAAAAAGAAAAGTATCCTTTCGAGCCTCTGCCGAGTACATATATGGTAGCTGCCGCGAAAAAACGGC
ATATCGGAGGGGGAAAGGAT

Downstream 100 bases:

>100_bases
ATATGATGAAGAAAGACCATTCCAATCAGGAATGGTCTTTTTTTATGCAATTCTTCAGCGAGCAGCCGAAAACAGACTAA
AAAATGAAACTATTAAATTT

Product: YcsK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTLQYTALGDSLTVGVGAGLFEPGFVQRYKRKMEEDLNEEVSLIVFAKSGLETSEILAMLNEPFIMEQVKKADVITITGC
GNDLLQSLEIYEKEKDEHVFLEASSHCQKNYSGMLEKIREIKGEKDTRYLVRLLNLYNPFPSIELADKWISGFNRHLKQL
ESAPQIKVIDTYAVFKGREKEYLSIDRVHPSSRGYEAMSEKLRAAGYGRLEG

Sequences:

>Translated_212_residues
MTLQYTALGDSLTVGVGAGLFEPGFVQRYKRKMEEDLNEEVSLIVFAKSGLETSEILAMLNEPFIMEQVKKADVITITGC
GNDLLQSLEIYEKEKDEHVFLEASSHCQKNYSGMLEKIREIKGEKDTRYLVRLLNLYNPFPSIELADKWISGFNRHLKQL
ESAPQIKVIDTYAVFKGREKEYLSIDRVHPSSRGYEAMSEKLRAAGYGRLEG
>Mature_211_residues
TLQYTALGDSLTVGVGAGLFEPGFVQRYKRKMEEDLNEEVSLIVFAKSGLETSEILAMLNEPFIMEQVKKADVITITGCG
NDLLQSLEIYEKEKDEHVFLEASSHCQKNYSGMLEKIREIKGEKDTRYLVRLLNLYNPFPSIELADKWISGFNRHLKQLE
SAPQIKVIDTYAVFKGREKEYLSIDRVHPSSRGYEAMSEKLRAAGYGRLEG

Specific function: Lipase involved in spore germination

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LIPC_BACLD (Q65NA4)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_077740.1
- RefSeq:   YP_090153.1
- ProteinModelPortal:   Q65NA4
- STRING:   Q65NA4
- EnsemblBacteria:   EBBACT00000057330
- EnsemblBacteria:   EBBACT00000059834
- GeneID:   3030156
- GeneID:   3098044
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00504
- KEGG:   bli:BL02812
- NMPDR:   fig|279010.5.peg.591
- eggNOG:   COG2755
- GeneTree:   EBGT00050000000506
- HOGENOM:   HBG338540
- OMA:   ITITGCG
- ProtClustDB:   CLSK886711
- BioCyc:   BLIC279010-1:BLI00504-MONOMER
- BioCyc:   BLIC279010:BL02812-MONOMER
- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087
- Gene3D:   G3DSA:3.40.50.1110

Pfam domain/function: PF00657 Lipase_GDSL; SSF52266 Esterase_SGNH_hydro-type

EC number: NA

Molecular weight: Translated: 24123; Mature: 23992

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS01098 LIPASE_GDSL_SER

Important sites: ACT_SITE 11-11 ACT_SITE 186-186 ACT_SITE 189-189 BINDING 50-50 BINDING 82-82

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQYTALGDSLTVGVGAGLFEPGFVQRYKRKMEEDLNEEVSLIVFAKSGLETSEILAML
CEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
NEPFIMEQVKKADVITITGCGNDLLQSLEIYEKEKDEHVFLEASSHCQKNYSGMLEKIRE
CCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
IKGEKDTRYLVRLLNLYNPFPSIELADKWISGFNRHLKQLESAPQIKVIDTYAVFKGREK
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCC
EYLSIDRVHPSSRGYEAMSEKLRAAGYGRLEG
CCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLQYTALGDSLTVGVGAGLFEPGFVQRYKRKMEEDLNEEVSLIVFAKSGLETSEILAML
EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
NEPFIMEQVKKADVITITGCGNDLLQSLEIYEKEKDEHVFLEASSHCQKNYSGMLEKIRE
CCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
IKGEKDTRYLVRLLNLYNPFPSIELADKWISGFNRHLKQLESAPQIKVIDTYAVFKGREK
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCC
EYLSIDRVHPSSRGYEAMSEKLRAAGYGRLEG
CCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA