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The map label for this gene is ycsI

Identifier: 52784320

GI number: 52784320

Start: 506525

End: 507313

Strand: Direct

Name: ycsI

Synonym: BLi00500

Alternate gene names: NA

Gene position: 506525-507313 (Clockwise)

Preceding gene: 52784319

Following gene: 52784321

Centisome position: 12.0

GC content: 51.96

Gene sequence:

>789_bases
TTGCATGTAAATGAAATGCGTCCTGACGAAGTCAGGGCTCTGATTCGAAAAGGGGAAATAACGGGTCCGACAGCCGGCAT
GGCCGGGGGTTTTACCCAGGCAAACCTGGTGATTTTGAAAAAAGAGCTCGCTTTTGAGTTCTTGCTGTTTTGCCAGCGCA
ATCAAAAGCCGTGTCCGATTCTTGATGTCACGGACCCCGGATCTCCGGTTCCGTCCATCACGGCGCCGGACGCTGATATC
CGCACCGATTTTCCAAAATACCGCGTATACAAGCGTGGCGAATTGGCGGATGAAGTGACAGATATCTCTTCTTTATGGGA
AGACGACATGGTCGGTTTTTTAATCGGCTGCAGCTTTACGTTCGAACAAGCGTTAATGAATAACGGAATCCCTGTCAGAC
ACATTGAAGAAAAGCGAAATGTCCCGATGTATCAAACGAATATTCCTTGTGTCCCGGCAGGCCGTTTTCAAGGGCCTATG
GTCGTCAGCATGAGGCCGGTTCCGGAAGAGCAGGCGGTGCGAGCCGTTCAGGTTACATCAAGGCTTCCCGCCGTTCACGG
AGGGCCTGTCCATATCGGCAGTCCAGAAGCCATCGGTATAACAGACATCGCAAAACCCGATTTCGGCGATGCGGTAACGA
TAAAAAAAGGGGAAGTTCCGGTATTCTGGGCTTGCGGCGTCACCCCTCAGGCAGTCGCAATGCACGCAAGGCCGGAGCTG
ATGATTACGCATTCGCCCGGCCATATGCTGGTTACCGATGTTCGGGATGAACAATTTGGTGTGTTATAG

Upstream 100 bases:

>100_bases
TCTGGCTTACAATTCCGGGCATTCTGGTCGTTATTGTCATGGCCATCATGGGAGGCTATACGTTAATCAATGAAATTCCT
AAGTTATGGGGATGATCTCG

Downstream 100 bases:

>100_bases
GATTTCAAAATCAATACAGAGCGGTTTATCTGTATTGATTTTTAATTTAAGGGGATGAAAGGCAAGGTGAAACAGAATTG
AAAAATCTTTCGAATGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPILDVTDPGSPVPSITAPDADI
RTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFTFEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPM
VVSMRPVPEEQAVRAVQVTSRLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPEL
MITHSPGHMLVTDVRDEQFGVL

Sequences:

>Translated_262_residues
MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPILDVTDPGSPVPSITAPDADI
RTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFTFEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPM
VVSMRPVPEEQAVRAVQVTSRLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPEL
MITHSPGHMLVTDVRDEQFGVL
>Mature_262_residues
MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPILDVTDPGSPVPSITAPDADI
RTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFTFEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPM
VVSMRPVPEEQAVRAVQVTSRLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPEL
MITHSPGHMLVTDVRDEQFGVL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=262, Percent_Identity=33.587786259542, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI156139133, Length=262, Percent_Identity=33.587786259542, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI156139131, Length=262, Percent_Identity=33.587786259542, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI156139129, Length=262, Percent_Identity=33.587786259542, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI156139137, Length=262, Percent_Identity=31.2977099236641, Blast_Score=128, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2808_BACLD (Q65NA8)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_077736.1
- RefSeq:   YP_090149.1
- ProteinModelPortal:   Q65NA8
- SMR:   Q65NA8
- STRING:   Q65NA8
- EnsemblBacteria:   EBBACT00000054918
- EnsemblBacteria:   EBBACT00000059443
- GeneID:   3030144
- GeneID:   3099647
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00500
- KEGG:   bli:BL02808
- NMPDR:   fig|279010.5.peg.587
- eggNOG:   COG4336
- GeneTree:   EBGT00050000001696
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   BLIC279010-1:BLI00500-MONOMER
- BioCyc:   BLIC279010:BL02808-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28740; Mature: 28740

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCE
LDVTDPGSPVPSITAPDADIRTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFT
EEECCCCCCCCCCCCCCCCHHCCCCHHEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHH
FEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPMVVSMRPVPEEQAVRAVQVTS
HHHHHHHCCCCEEEEHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
RLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPEL
HCCCCCCCEEEECCCCCCCEECCCCCCCCCEEEEECCCCCEEEECCCCHHHEEEECCCCE
MITHSPGHMLVTDVRDEQFGVL
EEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCE
LDVTDPGSPVPSITAPDADIRTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFT
EEECCCCCCCCCCCCCCCCHHCCCCHHEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHH
FEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPMVVSMRPVPEEQAVRAVQVTS
HHHHHHHCCCCEEEEHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
RLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPEL
HCCCCCCCEEEECCCCCCCEECCCCCCCCCEEEEECCCCCEEEECCCCHHHEEEECCCCE
MITHSPGHMLVTDVRDEQFGVL
EEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA