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The map label for this gene is ycsD [H]

Identifier: 52784309

GI number: 52784309

Start: 496783

End: 496968

Strand: Direct

Name: ycsD [H]

Synonym: BLi00489

Alternate gene names: 52784309

Gene position: 496783-496968 (Clockwise)

Preceding gene: 52784308

Following gene: 52784310

Centisome position: 11.76

GC content: 38.71

Gene sequence:

>186_bases
ATGAAACTGCTGAAAAAAAAGATGATCAGCATGAACAACCCTGTACTGCCGCATCGATACCCATTTCTATTCATAGATTG
TGTTGTAGAGAGTGAGCCGGGAAAATGGGTGAAAGGCTATAAATTCATAACGGAAAACGACTGGTTCATCACCGAAAATC
AAAAGGAAATGCCATTTTCATCTTAA

Upstream 100 bases:

>100_bases
AAATCGAATTGATGAAGCGAAGCCGGAGCTTAAGCCCCGGCTTTTGGTCATGGTGAAGCTTGCAATTGATCGTTCAGCAG
CCATTTAAAAAGAGAAAAAA

Downstream 100 bases:

>100_bases
TAGAAGCGCTGGCTCAGACCGCAGCATTTACTGCGTTGAAAGAACCGGCTGAAATCGGCTTTCTGTCTTCGGTGAAAAAA
GCCGAATGCACCGGCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MKLLKKKMISMNNPVLPHRYPFLFIDCVVESEPGKWVKGYKFITENDWFITENQKEMPFSS

Sequences:

>Translated_61_residues
MKLLKKKMISMNNPVLPHRYPFLFIDCVVESEPGKWVKGYKFITENDWFITENQKEMPFSS
>Mature_61_residues
MKLLKKKMISMNNPVLPHRYPFLFIDCVVESEPGKWVKGYKFITENDWFITENQKEMPFSS

Specific function: Unknown

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013114 [H]

Pfam domain/function: PF07977 FabA [H]

EC number: NA

Molecular weight: Translated: 7312; Mature: 7312

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKKKMISMNNPVLPHRYPFLFIDCVVESEPGKWVKGYKFITENDWFITENQKEMPFS
CCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEECCEEEEECCCEEEECCCCCCCCC
S
C
>Mature Secondary Structure
MKLLKKKMISMNNPVLPHRYPFLFIDCVVESEPGKWVKGYKFITENDWFITENQKEMPFS
CCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEECCEEEEECCCEEEECCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10568751 [H]