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The map label for this gene is yclJ [H]

Identifier: 52784279

GI number: 52784279

Start: 460425

End: 461111

Strand: Direct

Name: yclJ [H]

Synonym: BLi00459

Alternate gene names: 52784279

Gene position: 460425-461111 (Clockwise)

Preceding gene: 52784276

Following gene: 52784280

Centisome position: 10.9

GC content: 45.12

Gene sequence:

>687_bases
ATGAAAATATTAATGATTGAAGATAATTTAAGCGTATGTACTATGACAGAGATGTTTTTTGCAAAAGAAGGATTTGAAAC
AGAGTTCGTCCATGACGGACTCGAAGGATATAACCGTTTTAAATCAGGTGATTGGGATTTGCTGATCATCGATATCATGC
TGCCGTCGATGGATGGGGTCACGATCTGCAAAAAGGTCAGAGAAGAGAGCACGGTTCCGATTATTATGCTGACGGCAAAG
GATACGGAATCAGACCAGGTGCTCGGTTTTGAGCTCGGGGCTGATGATTATGTGACCAAGCCGTTCAGCCCTTTGGCGCT
TGTGGCGAGAATCAAAGCGGTGAGCCGGAGATATCAAAACGCCGGCCGGCAGGATTCCGCTGACAGCGACACGCTTGAAA
CGGAACATTTTAAAATCAATAAAAAAACGAGAGAAGTGTTTTTGGACGGCGTTCAAATTCAAAATTTGACGCCTAAGGAG
TTCGATTTATTGTATTACTTGGTGCAAAGCCCGAAACAGGTTTTTTCAAGGGAGCAGCTGCTTGAGCAGGTTTGGGGATA
CCAATTCTACGGAGACGAGCGGACTGTGGATGTTCATATTAAACGGCTGAGAAAAAAGCTTGGCAGCGACTCGCGGCCGT
TTCTTTACACCGTATGGGGAGTAGGGTACAAGTTCGATGAAGATTAA

Upstream 100 bases:

>100_bases
AAACTGTTGCCAGACCTTTAAATGTTCAGAATGGAATTGAGAAATGGCTGGGCCCTATGTAAAATGAATCTAACGTTTGT
CTAGCGGAGGCACTTTTACG

Downstream 100 bases:

>100_bases
GTATCTCTATCAGCTGCTGGCCAGTCACATCAGTATATTAGTCTTGGCTTTTCTCATCACGGGGGCGCTGTTTTCACACT
TTGCCAAAGACTTTGCATAC

Product: YclJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKILMIEDNLSVCTMTEMFFAKEGFETEFVHDGLEGYNRFKSGDWDLLIIDIMLPSMDGVTICKKVREESTVPIIMLTAK
DTESDQVLGFELGADDYVTKPFSPLALVARIKAVSRRYQNAGRQDSADSDTLETEHFKINKKTREVFLDGVQIQNLTPKE
FDLLYYLVQSPKQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLGSDSRPFLYTVWGVGYKFDED

Sequences:

>Translated_228_residues
MKILMIEDNLSVCTMTEMFFAKEGFETEFVHDGLEGYNRFKSGDWDLLIIDIMLPSMDGVTICKKVREESTVPIIMLTAK
DTESDQVLGFELGADDYVTKPFSPLALVARIKAVSRRYQNAGRQDSADSDTLETEHFKINKKTREVFLDGVQIQNLTPKE
FDLLYYLVQSPKQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLGSDSRPFLYTVWGVGYKFDED
>Mature_228_residues
MKILMIEDNLSVCTMTEMFFAKEGFETEFVHDGLEGYNRFKSGDWDLLIIDIMLPSMDGVTICKKVREESTVPIIMLTAK
DTESDQVLGFELGADDYVTKPFSPLALVARIKAVSRRYQNAGRQDSADSDTLETEHFKINKKTREVFLDGVQIQNLTPKE
FDLLYYLVQSPKQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLGSDSRPFLYTVWGVGYKFDED

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=37.6068376068376, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=39.7379912663755, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=37.2294372294372, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=40.2654867256637, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=37.4449339207048, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=35.9649122807018, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=33.6244541484716, Blast_Score=133, Evalue=8e-33,
Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=34.2105263157895, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=33.920704845815, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=31.858407079646, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=32.8947368421053, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=32.1739130434783, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=32.034632034632, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788550, Length=102, Percent_Identity=35.2941176470588, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=26.271186440678, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26399; Mature: 26399

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILMIEDNLSVCTMTEMFFAKEGFETEFVHDGLEGYNRFKSGDWDLLIIDIMLPSMDGV
CEEEEEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCH
TICKKVREESTVPIIMLTAKDTESDQVLGFELGADDYVTKPFSPLALVARIKAVSRRYQN
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AGRQDSADSDTLETEHFKINKKTREVFLDGVQIQNLTPKEFDLLYYLVQSPKQVFSREQL
CCCCCCCCCCCCCCCEEEECHHHHHHHHCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHH
LEQVWGYQFYGDERTVDVHIKRLRKKLGSDSRPFLYTVWGVGYKFDED
HHHHHCEEEECCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEECCC
>Mature Secondary Structure
MKILMIEDNLSVCTMTEMFFAKEGFETEFVHDGLEGYNRFKSGDWDLLIIDIMLPSMDGV
CEEEEEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCH
TICKKVREESTVPIIMLTAKDTESDQVLGFELGADDYVTKPFSPLALVARIKAVSRRYQN
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AGRQDSADSDTLETEHFKINKKTREVFLDGVQIQNLTPKEFDLLYYLVQSPKQVFSREQL
CCCCCCCCCCCCCCCEEEECHHHHHHHHCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHH
LEQVWGYQFYGDERTVDVHIKRLRKKLGSDSRPFLYTVWGVGYKFDED
HHHHHCEEEECCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]