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The map label for this gene is gerKB [H]

Identifier: 52784275

GI number: 52784275

Start: 456146

End: 457252

Strand: Direct

Name: gerKB [H]

Synonym: BLi00455

Alternate gene names: 52784275

Gene position: 456146-457252 (Clockwise)

Preceding gene: 52784274

Following gene: 52784276

Centisome position: 10.8

GC content: 44.26

Gene sequence:

>1107_bases
ATGGAGAAAGCAAAAATCAGTGCTGCACAGCTGTTCGTGCTTATTGTTCTGTTTGAACTCAGCAGCTCTCTGCTGATTTT
TCCAGGACAATCTGCCGAACAGGACGCCTGGATCGCGATCTTGTTCGGAACAGTCGGAGGGCTGGCTTTGTTTATGATGC
ATCACTTTTTCTACCAGGTGAATCCCGACGCCTCTCCCTATGAAACGCTGATGAATATTTTTGGAAAACCGGTTGGCTGG
AGCATGACATTTATCTACATTGTTTATTATTGTTACATTGCGGCAAGGGTTTTGCGCGATTTTGGAGAAATGCTGCTGAC
ATCGGCTTATCCGAACACGCCGATTATCTTCGCTAATGGATTGTTGATTGCAGTTTGTATTTTTACTGTGAGGAAGGGAA
TCGAGGTCCTTGCCCGTTCAGGCGAGCTGTTGTTTGGCATCATGTTTTGGCTTGCTGTCACAGGCCTAATCCTGATAGTT
TCGTCAGGCTTGATCAAACCGAAAGAGCTTTTGCCCATTCTTGGAAACGGACCCGGTCCGATGTTTCATGCCGTGTTCAC
GCAAACGCTGTATTTTCCGTTTGGAGAAATTATCGCCTTTACATTGATCCTGCCGTATTTAAAGGAAAAGAAACTAGCGA
AAAAAGCCGGGTTGTTGGGAATTGCCATCAGCGGCCTCATCCTGGCTTTTAATGTCGCATTGAACATCAGCGTGCTTGGC
GTCGATCTCAATATGCGGTCGCGCTTCCCATTGCTGAGTACGATCCAGACGATTCAAGTCGCCGAATTCTTGGACAGGCT
TGATGTATTTTTCATGCTCGTGCTGGTGATTGGCGGTTTTTTTAAGATGAGCATTTTCATGTATGCCGTAACCGAAGGCG
TGACCGTTTTATTCAAGCTTAAAAACCCCTCCAAAGTTGTTCATGTCATCGGCATTATTATTTTGATTTTGTCCGTCTCC
ATTGCCAGCAATATTTCAGAGCATGTTAAAGAAGGAATCGAGTTTGTTCCATTATATGTCCATTTGCCGATGCAGGTGAT
CCTTCCCGCTTTTATTTGCATAGTCACTTATGTGAAAATGAAAAAAAATAAAAAAAAGGCCATGTAA

Upstream 100 bases:

>100_bases
GGTTAATGCATACGTACGAAGAACAGGTTTAAGAAACAATCCGAACATTTTGAATCATCATGAAGGGCGTTCTTGAATGA
AAGAGAGAGGAGGGCTTTAA

Downstream 100 bases:

>100_bases
TGGATTGACCCCGCCCTTAGGGCACCCTTTAACATGACAGACGAGGTGAGGTTTGATGCTCTATACGGTAAAAGAAGTGG
CTCGCTTGGCGAATATCACG

Product: GerKB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEKAKISAAQLFVLIVLFELSSSLLIFPGQSAEQDAWIAILFGTVGGLALFMMHHFFYQVNPDASPYETLMNIFGKPVGW
SMTFIYIVYYCYIAARVLRDFGEMLLTSAYPNTPIIFANGLLIAVCIFTVRKGIEVLARSGELLFGIMFWLAVTGLILIV
SSGLIKPKELLPILGNGPGPMFHAVFTQTLYFPFGEIIAFTLILPYLKEKKLAKKAGLLGIAISGLILAFNVALNISVLG
VDLNMRSRFPLLSTIQTIQVAEFLDRLDVFFMLVLVIGGFFKMSIFMYAVTEGVTVLFKLKNPSKVVHVIGIIILILSVS
IASNISEHVKEGIEFVPLYVHLPMQVILPAFICIVTYVKMKKNKKKAM

Sequences:

>Translated_368_residues
MEKAKISAAQLFVLIVLFELSSSLLIFPGQSAEQDAWIAILFGTVGGLALFMMHHFFYQVNPDASPYETLMNIFGKPVGW
SMTFIYIVYYCYIAARVLRDFGEMLLTSAYPNTPIIFANGLLIAVCIFTVRKGIEVLARSGELLFGIMFWLAVTGLILIV
SSGLIKPKELLPILGNGPGPMFHAVFTQTLYFPFGEIIAFTLILPYLKEKKLAKKAGLLGIAISGLILAFNVALNISVLG
VDLNMRSRFPLLSTIQTIQVAEFLDRLDVFFMLVLVIGGFFKMSIFMYAVTEGVTVLFKLKNPSKVVHVIGIIILILSVS
IASNISEHVKEGIEFVPLYVHLPMQVILPAFICIVTYVKMKKNKKKAM
>Mature_368_residues
MEKAKISAAQLFVLIVLFELSSSLLIFPGQSAEQDAWIAILFGTVGGLALFMMHHFFYQVNPDASPYETLMNIFGKPVGW
SMTFIYIVYYCYIAARVLRDFGEMLLTSAYPNTPIIFANGLLIAVCIFTVRKGIEVLARSGELLFGIMFWLAVTGLILIV
SSGLIKPKELLPILGNGPGPMFHAVFTQTLYFPFGEIIAFTLILPYLKEKKLAKKAGLLGIAISGLILAFNVALNISVLG
VDLNMRSRFPLLSTIQTIQVAEFLDRLDVFFMLVLVIGGFFKMSIFMYAVTEGVTVLFKLKNPSKVVHVIGIIILILSVS
IASNISEHVKEGIEFVPLYVHLPMQVILPAFICIVTYVKMKKNKKKAM

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40839; Mature: 40839

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAKISAAQLFVLIVLFELSSSLLIFPGQSAEQDAWIAILFGTVGGLALFMMHHFFYQV
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEE
NPDASPYETLMNIFGKPVGWSMTFIYIVYYCYIAARVLRDFGEMLLTSAYPNTPIIFANG
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECH
LLIAVCIFTVRKGIEVLARSGELLFGIMFWLAVTGLILIVSSGLIKPKELLPILGNGPGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHCCCCCCH
MFHAVFTQTLYFPFGEIIAFTLILPYLKEKKLAKKAGLLGIAISGLILAFNVALNISVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEE
VDLNMRSRFPLLSTIQTIQVAEFLDRLDVFFMLVLVIGGFFKMSIFMYAVTEGVTVLFKL
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
KNPSKVVHVIGIIILILSVSIASNISEHVKEGIEFVPLYVHLPMQVILPAFICIVTYVKM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCHHHHHHHHHHHHHHHHH
KKNKKKAM
HHHHCCCC
>Mature Secondary Structure
MEKAKISAAQLFVLIVLFELSSSLLIFPGQSAEQDAWIAILFGTVGGLALFMMHHFFYQV
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEE
NPDASPYETLMNIFGKPVGWSMTFIYIVYYCYIAARVLRDFGEMLLTSAYPNTPIIFANG
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECH
LLIAVCIFTVRKGIEVLARSGELLFGIMFWLAVTGLILIVSSGLIKPKELLPILGNGPGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHCCCCCCH
MFHAVFTQTLYFPFGEIIAFTLILPYLKEKKLAKKAGLLGIAISGLILAFNVALNISVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEE
VDLNMRSRFPLLSTIQTIQVAEFLDRLDVFFMLVLVIGGFFKMSIFMYAVTEGVTVLFKL
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
KNPSKVVHVIGIIILILSVSIASNISEHVKEGIEFVPLYVHLPMQVILPAFICIVTYVKM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCHHHHHHHHHHHHHHHHH
KKNKKKAM
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]