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The map label for this gene is gerKC [H]

Identifier: 52784274

GI number: 52784274

Start: 454898

End: 456121

Strand: Direct

Name: gerKC [H]

Synonym: BLi00454

Alternate gene names: 52784274

Gene position: 454898-456121 (Clockwise)

Preceding gene: 52784273

Following gene: 52784275

Centisome position: 10.77

GC content: 45.75

Gene sequence:

>1224_bases
ATGAAACGAATCGTTAAAATTGTGCTCCTACTTGCCGCCATTGTCCTTCTTCAAGGGTGCTGGGATAAAAGAGAGCTGAC
AGATCTGCTGCTGATCACTGCCATCGGTATTGATAAAGGTAAAGATACAGATTACGAATTAAGCTATCAGATCGTCAATC
CGATCAATGTGACAGGCGGCCTTCAAGGCGGACAGGGAGGAGACAGGCCGCCGATTTCAAGCTATTCTGTGACGGGCAAC
AATCTGACGGAAATGAGCAGACATGCGTCAGCAAAAATGTCGCGGGAAATTTATTACTCCCACACCAACCTCGTGGTTGT
CGATGAAAAACTCGCCAAGGAGGAAGGCTTGATCAAAATTCTGGATGTTCTTGACCGGGACACCGATTTTCGTACAACGG
CGACGATTATTATTTCCCGCGGCCAAAAAGCGAAAACATTCATCCGGACGCTGACGCCGATCGATAAGATCCCGTCAAAT
AAAGTAAACAAAACGCTGCAATTTACCGAAGAGCATTTGGGAGAACATATGAAAACGAGCGTCCAGGATGTCATCAAGTG
CTTAACATCGAAGGCAAAGCACCCGATTATTTCTTCCTTTAAAGTAACCGGAAACAAGGAAAAGGGTGAAAAAATGGAAA
ACGTGCAGTCTACATCTCCTGAGGCAATAGTCGAAGCGGACGGCTTGGCGGTCATTAAAGAGGGAAAGCTCGTCAATTGG
CTTGAAGGCAAAACGGCGAGAGGCGTTTTATGGCTGCGCAATAAAATCAGCAGAACGTATTTGACAATTCCAATGAATCA
TGAGAGAGATGCCGTCACATTTGACGTCATCCGCCAAAAAACAAAAATCGGATCTCACCTGAAAAACGGCAAACCGGCGA
TTTCGGTTGACGTGGCTATGGAAGGGGACATCGGCGAAACAACTGTGCCGATTCACCTGGATGATCCAAAAGTGCTGAGC
GATATCGAAAGGAAGGTGGCAAAGGAACTGAAAAATGAATTGCAGAATACGATTGACATTGTTAAGCGGAACAAGACGGA
TGTTCTGCAATTCGGTGATGTTGTGTATCGCACCCACCCCGAAGTGTGGAAAAAGATGGAGGGTGAATGGAGCAATCGGT
ATTTTCCTGACACAGACGTCGACATTACGGTTAATGCATACGTACGAAGAACAGGTTTAAGAAACAATCCGAACATTTTG
AATCATCATGAAGGGCGTTCTTGA

Upstream 100 bases:

>100_bases
CTGATCGGCAATGACAATAAGGTGCGCCAAGGAGAATACCAGAAACCCGAGCCCCCGGATTCAGGCGATATGAAGACAAA
ACAAGAAGATGGTGATCCAA

Downstream 100 bases:

>100_bases
ATGAAAGAGAGAGGAGGGCTTTAAATGGAGAAAGCAAAAATCAGTGCTGCACAGCTGTTCGTGCTTATTGTTCTGTTTGA
ACTCAGCAGCTCTCTGCTGA

Product: GerKC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKRIVKIVLLLAAIVLLQGCWDKRELTDLLLITAIGIDKGKDTDYELSYQIVNPINVTGGLQGGQGGDRPPISSYSVTGN
NLTEMSRHASAKMSREIYYSHTNLVVVDEKLAKEEGLIKILDVLDRDTDFRTTATIIISRGQKAKTFIRTLTPIDKIPSN
KVNKTLQFTEEHLGEHMKTSVQDVIKCLTSKAKHPIISSFKVTGNKEKGEKMENVQSTSPEAIVEADGLAVIKEGKLVNW
LEGKTARGVLWLRNKISRTYLTIPMNHERDAVTFDVIRQKTKIGSHLKNGKPAISVDVAMEGDIGETTVPIHLDDPKVLS
DIERKVAKELKNELQNTIDIVKRNKTDVLQFGDVVYRTHPEVWKKMEGEWSNRYFPDTDVDITVNAYVRRTGLRNNPNIL
NHHEGRS

Sequences:

>Translated_407_residues
MKRIVKIVLLLAAIVLLQGCWDKRELTDLLLITAIGIDKGKDTDYELSYQIVNPINVTGGLQGGQGGDRPPISSYSVTGN
NLTEMSRHASAKMSREIYYSHTNLVVVDEKLAKEEGLIKILDVLDRDTDFRTTATIIISRGQKAKTFIRTLTPIDKIPSN
KVNKTLQFTEEHLGEHMKTSVQDVIKCLTSKAKHPIISSFKVTGNKEKGEKMENVQSTSPEAIVEADGLAVIKEGKLVNW
LEGKTARGVLWLRNKISRTYLTIPMNHERDAVTFDVIRQKTKIGSHLKNGKPAISVDVAMEGDIGETTVPIHLDDPKVLS
DIERKVAKELKNELQNTIDIVKRNKTDVLQFGDVVYRTHPEVWKKMEGEWSNRYFPDTDVDITVNAYVRRTGLRNNPNIL
NHHEGRS
>Mature_407_residues
MKRIVKIVLLLAAIVLLQGCWDKRELTDLLLITAIGIDKGKDTDYELSYQIVNPINVTGGLQGGQGGDRPPISSYSVTGN
NLTEMSRHASAKMSREIYYSHTNLVVVDEKLAKEEGLIKILDVLDRDTDFRTTATIIISRGQKAKTFIRTLTPIDKIPSN
KVNKTLQFTEEHLGEHMKTSVQDVIKCLTSKAKHPIISSFKVTGNKEKGEKMENVQSTSPEAIVEADGLAVIKEGKLVNW
LEGKTARGVLWLRNKISRTYLTIPMNHERDAVTFDVIRQKTKIGSHLKNGKPAISVDVAMEGDIGETTVPIHLDDPKVLS
DIERKVAKELKNELQNTIDIVKRNKTDVLQFGDVVYRTHPEVWKKMEGEWSNRYFPDTDVDITVNAYVRRTGLRNNPNIL
NHHEGRS

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 45756; Mature: 45756

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVKIVLLLAAIVLLQGCWDKRELTDLLLITAIGIDKGKDTDYELSYQIVNPINVTGG
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEECCC
LQGGQGGDRPPISSYSVTGNNLTEMSRHASAKMSREIYYSHTNLVVVDEKLAKEEGLIKI
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEECCCEEEECHHHHHHCCHHHH
LDVLDRDTDFRTTATIIISRGQKAKTFIRTLTPIDKIPSNKVNKTLQFTEEHLGEHMKTS
HHHHCCCCCCCEEEEEEEECCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
VQDVIKCLTSKAKHPIISSFKVTGNKEKGEKMENVQSTSPEAIVEADGLAVIKEGKLVNW
HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCEEEE
LEGKTARGVLWLRNKISRTYLTIPMNHERDAVTFDVIRQKTKIGSHLKNGKPAISVDVAM
ECCCCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
EGDIGETTVPIHLDDPKVLSDIERKVAKELKNELQNTIDIVKRNKTDVLQFGDVVYRTHP
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEECCH
EVWKKMEGEWSNRYFPDTDVDITVNAYVRRTGLRNNPNILNHHEGRS
HHHHHHCCCCCCCCCCCCCCEEEEEEHHEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRIVKIVLLLAAIVLLQGCWDKRELTDLLLITAIGIDKGKDTDYELSYQIVNPINVTGG
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEECCC
LQGGQGGDRPPISSYSVTGNNLTEMSRHASAKMSREIYYSHTNLVVVDEKLAKEEGLIKI
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEECCCEEEECHHHHHHCCHHHH
LDVLDRDTDFRTTATIIISRGQKAKTFIRTLTPIDKIPSNKVNKTLQFTEEHLGEHMKTS
HHHHCCCCCCCEEEEEEEECCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
VQDVIKCLTSKAKHPIISSFKVTGNKEKGEKMENVQSTSPEAIVEADGLAVIKEGKLVNW
HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCEEEE
LEGKTARGVLWLRNKISRTYLTIPMNHERDAVTFDVIRQKTKIGSHLKNGKPAISVDVAM
ECCCCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
EGDIGETTVPIHLDDPKVLSDIERKVAKELKNELQNTIDIVKRNKTDVLQFGDVVYRTHP
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEECCH
EVWKKMEGEWSNRYFPDTDVDITVNAYVRRTGLRNNPNILNHHEGRS
HHHHHHCCCCCCCCCCCCCCEEEEEEHHEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]