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The map label for this gene is ydjC [C]

Identifier: 52784159

GI number: 52784159

Start: 311419

End: 312201

Strand: Direct

Name: ydjC [C]

Synonym: BLi00337

Alternate gene names: 52784159

Gene position: 311419-312201 (Clockwise)

Preceding gene: 52784158

Following gene: 52784160

Centisome position: 7.37

GC content: 45.34

Gene sequence:

>783_bases
TTGAGTTCTTCATTGAACGCGATTATGGACAAAGGGGGAAATGAAAGCGTGAAATCTCTAATCATAAATGCAGATGATTT
TGGATTTTCAAGGGGAGTCAACCTTGGCATTATTGAAGCTTTCCAGCACGGGGTCCTCACATCGACTACCCTCATGGTCA
ATATGCAAGAAGCGGATCATGCCGTCGAACTCGCACGGCAAAATCCAGAACTCGGAGTCGGGATCCACTTGACATTGACG
GCCGGGCGTCCGATTCTTGGCGGACTGCATACGATAACAGATGAAGAAGGGAATTTTCGCAAGCTTTTGTATTACCAAGG
TTTTTTCGACATTGATCTTGAGGAAGTATATCGAGAGTGGAAAGCGCAAATAGAGAAGGCTTTGTCCTGCGGTTTAAATC
CGACACATATCGACAGCCATCATCATATTCATACATACGGAAATCTCCCTGAGGTGTTTGTAGAGGTTGCGAAAGAGTAT
GATCTGCCTTGCAGAAAGGTCAATCATGACCATCCTTCACTGTGGAAGGGTGTAAGGTCTAACGATGCTTTTGAGCTGAA
AGTCGACCGATTGAAGGATCTATCGAGCTTCTTTAATGATTATCAAGACGCAGCTGTGATTGAAGTGATGTGCCATCCGG
CTTATGTCGATAAATGTCTGCTTGAAAAATCGTCCTTCCATTATCCTCGGGCATATGAACTTTCACTGCTGACGGAACCT
TCTCTCAAAGCCGCTTTACAACACTGTCCGGATATTCGCCTCACGTCTTACGCCGGTCTATGA

Upstream 100 bases:

>100_bases
ATTACACAAGGCACGCCTTGCTTCCAGATATCGACGCAAACATTTTTGGCGTCTGAAGAGGTTGTCGAGTATTCTATGGC
CTATTTTCGCGGTGACCGCG

Downstream 100 bases:

>100_bases
AAGAGATGCCGCTTCTATTCCTTGGCTTAATAAGATGTGAAATGGGGTAGGAAGCGGCGGTTGTTTAGTCAAATACTTCA
TATTTACAGTTTGGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSSSLNAIMDKGGNESVKSLIINADDFGFSRGVNLGIIEAFQHGVLTSTTLMVNMQEADHAVELARQNPELGVGIHLTLT
AGRPILGGLHTITDEEGNFRKLLYYQGFFDIDLEEVYREWKAQIEKALSCGLNPTHIDSHHHIHTYGNLPEVFVEVAKEY
DLPCRKVNHDHPSLWKGVRSNDAFELKVDRLKDLSSFFNDYQDAAVIEVMCHPAYVDKCLLEKSSFHYPRAYELSLLTEP
SLKAALQHCPDIRLTSYAGL

Sequences:

>Translated_260_residues
MSSSLNAIMDKGGNESVKSLIINADDFGFSRGVNLGIIEAFQHGVLTSTTLMVNMQEADHAVELARQNPELGVGIHLTLT
AGRPILGGLHTITDEEGNFRKLLYYQGFFDIDLEEVYREWKAQIEKALSCGLNPTHIDSHHHIHTYGNLPEVFVEVAKEY
DLPCRKVNHDHPSLWKGVRSNDAFELKVDRLKDLSSFFNDYQDAAVIEVMCHPAYVDKCLLEKSSFHYPRAYELSLLTEP
SLKAALQHCPDIRLTSYAGL
>Mature_259_residues
SSSLNAIMDKGGNESVKSLIINADDFGFSRGVNLGIIEAFQHGVLTSTTLMVNMQEADHAVELARQNPELGVGIHLTLTA
GRPILGGLHTITDEEGNFRKLLYYQGFFDIDLEEVYREWKAQIEKALSCGLNPTHIDSHHHIHTYGNLPEVFVEVAKEYD
LPCRKVNHDHPSLWKGVRSNDAFELKVDRLKDLSSFFNDYQDAAVIEVMCHPAYVDKCLLEKSSFHYPRAYELSLLTEPS
LKAALQHCPDIRLTSYAGL

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=286, Percent_Identity=29.020979020979, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI1788028, Length=248, Percent_Identity=36.6935483870968, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 29215; Mature: 29084

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLNAIMDKGGNESVKSLIINADDFGFSRGVNLGIIEAFQHGVLTSTTLMVNMQEADH
CCCCHHHHHHCCCCCCHHHEEECCCCCCHHCCCCHHHHHHHHCCCEEEEEEEEEEHHHHH
AVELARQNPELGVGIHLTLTAGRPILGGLHTITDEEGNFRKLLYYQGFFDIDLEEVYREW
HHHHHHCCCCCCEEEEEEEECCCCHHCCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHH
KAQIEKALSCGLNPTHIDSHHHIHTYGNLPEVFVEVAKEYDLPCRKVNHDHPSLWKGVRS
HHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHCCCCCHHHHHCCCC
NDAFELKVDRLKDLSSFFNDYQDAAVIEVMCHPAYVDKCLLEKSSFHYPRAYELSLLTEP
CCCEEEEHHHHHHHHHHHHHHCCCEEEHEECCHHHHHHHHHHHCCCCCCCEEEEEEECCC
SLKAALQHCPDIRLTSYAGL
HHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure 
SSSLNAIMDKGGNESVKSLIINADDFGFSRGVNLGIIEAFQHGVLTSTTLMVNMQEADH
CCCHHHHHHCCCCCCHHHEEECCCCCCHHCCCCHHHHHHHHCCCEEEEEEEEEEHHHHH
AVELARQNPELGVGIHLTLTAGRPILGGLHTITDEEGNFRKLLYYQGFFDIDLEEVYREW
HHHHHHCCCCCCEEEEEEEECCCCHHCCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHH
KAQIEKALSCGLNPTHIDSHHHIHTYGNLPEVFVEVAKEYDLPCRKVNHDHPSLWKGVRS
HHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHCCCCCHHHHHCCCC
NDAFELKVDRLKDLSSFFNDYQDAAVIEVMCHPAYVDKCLLEKSSFHYPRAYELSLLTEP
CCCEEEEHHHHHHHHHHHHHHCCCEEEHEECCHHHHHHHHHHHCCCCCCCEEEEEEECCC
SLKAALQHCPDIRLTSYAGL
HHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA