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The map label for this gene is ydjC [C]

Identifier: 52784091

GI number: 52784091

Start: 240031

End: 240819

Strand: Direct

Name: ydjC [C]

Synonym: BLi00267

Alternate gene names: 52784091

Gene position: 240031-240819 (Clockwise)

Preceding gene: 52784087

Following gene: 52784092

Centisome position: 5.68

GC content: 46.26

Gene sequence:

>789_bases
ATGCCGCCGCATACTTTTTTAAAAAAACAGATAAGGGGTATCGGATCGATGAAAAAACTGATTATCAATGCTGATGATTT
TGGATATTCAAGAGGTGTGAACTACGGAATTATTGATGCCTATAAGCTCGGAATTTTAACATCAGCGACCTTTATGACGA
ATATGCCGGGCGCTGGTCACGCGGCCCGGCTGGCTCGCGAATCGCCCGGACTTGGGATCGGCGTACATTTGGTGCTGACC
TGCGGAAGGCCGCTTTTGTCTGACCACCGGACGATTGTCGATTCAAAGGGAAGTTTTCGCAATCTCGCATTTTATCAAGG
TGCTTTTACAATAGATGCCGATGAAGTATACCGCGAGTGGAAAACGCAGATTGAAACATGCATCAACATGGGCTTGAAAC
CCGATCATTTGGACAGCCACCATCACATCAATGCTTATCCGGGCATCTCTGACGTATTTTTGTCGCTCGCCAAGGAGTAT
CGCCTGCCTGTCAGACGTAATATGGAGAGCGCCATAATAACGGAAAAAGGAGTGAAAACGACAGACTCTTTCTCACCTGT
CCTTGAAGCGGCCTTAAAGGGTGAAGAAGCCGTCTCTGAACTGTTTGAAAAACATAATACCGTGGAGGTCATGACCCACC
CGGCATACCTCGATAAGGAGCTTTTGACGAACTCTTCATATACTTATCCAAGAGTCGATGAACTTGAGTTTTTAACCGAT
CCGGACGTTGTCATCCGCTTGAACAAGCTTGCGGATGTCCAGCTTGTATCATTTAGGAATTTGACATAA

Upstream 100 bases:

>100_bases
TATGAAAAATAGTTTAAAAGACTCGGGAGGTTTTTGTCAATCTACCAATCATCAGTTTTCACCAGTCACTTTTGTCGTTT
TCTATTTAGGGTAAAACCGT

Downstream 100 bases:

>100_bases
GGAGAATGCCGGAATGAAACATATACTTCAGCTGCTTGGAAAGTCTTTGCTGATTCCGATTACCGTTCTTCCGATCGCCG
GGCTGCTGCTGCGGCTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPPHTFLKKQIRGIGSMKKLIINADDFGYSRGVNYGIIDAYKLGILTSATFMTNMPGAGHAARLARESPGLGIGVHLVLT
CGRPLLSDHRTIVDSKGSFRNLAFYQGAFTIDADEVYREWKTQIETCINMGLKPDHLDSHHHINAYPGISDVFLSLAKEY
RLPVRRNMESAIITEKGVKTTDSFSPVLEAALKGEEAVSELFEKHNTVEVMTHPAYLDKELLTNSSYTYPRVDELEFLTD
PDVVIRLNKLADVQLVSFRNLT

Sequences:

>Translated_262_residues
MPPHTFLKKQIRGIGSMKKLIINADDFGYSRGVNYGIIDAYKLGILTSATFMTNMPGAGHAARLARESPGLGIGVHLVLT
CGRPLLSDHRTIVDSKGSFRNLAFYQGAFTIDADEVYREWKTQIETCINMGLKPDHLDSHHHINAYPGISDVFLSLAKEY
RLPVRRNMESAIITEKGVKTTDSFSPVLEAALKGEEAVSELFEKHNTVEVMTHPAYLDKELLTNSSYTYPRVDELEFLTD
PDVVIRLNKLADVQLVSFRNLT
>Mature_261_residues
PPHTFLKKQIRGIGSMKKLIINADDFGYSRGVNYGIIDAYKLGILTSATFMTNMPGAGHAARLARESPGLGIGVHLVLTC
GRPLLSDHRTIVDSKGSFRNLAFYQGAFTIDADEVYREWKTQIETCINMGLKPDHLDSHHHINAYPGISDVFLSLAKEYR
LPVRRNMESAIITEKGVKTTDSFSPVLEAALKGEEAVSELFEKHNTVEVMTHPAYLDKELLTNSSYTYPRVDELEFLTDP
DVVIRLNKLADVQLVSFRNLT

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=301, Percent_Identity=26.9102990033223, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI1788028, Length=238, Percent_Identity=36.1344537815126, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 29285; Mature: 29154

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPHTFLKKQIRGIGSMKKLIINADDFGYSRGVNYGIIDAYKLGILTSATFMTNMPGAGH
CCCHHHHHHHHHCCCHHHHHEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
AARLARESPGLGIGVHLVLTCGRPLLSDHRTIVDSKGSFRNLAFYQGAFTIDADEVYREW
HHHHHHCCCCCCCHHEEEEECCCHHHHCCCEEECCCCCCCEEEEECCEEEECHHHHHHHH
KTQIETCINMGLKPDHLDSHHHINAYPGISDVFLSLAKEYRLPVRRNMESAIITEKGVKT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHCCCCCCC
TDSFSPVLEAALKGEEAVSELFEKHNTVEVMTHPAYLDKELLTNSSYTYPRVDELEFLTD
CCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCHHCCCC
PDVVIRLNKLADVQLVSFRNLT
CHHEEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
PPHTFLKKQIRGIGSMKKLIINADDFGYSRGVNYGIIDAYKLGILTSATFMTNMPGAGH
CCHHHHHHHHHCCCHHHHHEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
AARLARESPGLGIGVHLVLTCGRPLLSDHRTIVDSKGSFRNLAFYQGAFTIDADEVYREW
HHHHHHCCCCCCCHHEEEEECCCHHHHCCCEEECCCCCCCEEEEECCEEEECHHHHHHHH
KTQIETCINMGLKPDHLDSHHHINAYPGISDVFLSLAKEYRLPVRRNMESAIITEKGVKT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHCCCCCCC
TDSFSPVLEAALKGEEAVSELFEKHNTVEVMTHPAYLDKELLTNSSYTYPRVDELEFLTD
CCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCHHCCCC
PDVVIRLNKLADVQLVSFRNLT
CHHEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]