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The map label for this gene is yvaQ [H]

Identifier: 52784083

GI number: 52784083

Start: 231290

End: 232996

Strand: Direct

Name: yvaQ [H]

Synonym: BLi00259

Alternate gene names: 52784083

Gene position: 231290-232996 (Clockwise)

Preceding gene: 52784082

Following gene: 52784084

Centisome position: 5.48

GC content: 45.93

Gene sequence:

>1707_bases
GTGAAAAGCCCAAGATGGAACAATATCACAATCGGCGGCAAATACGGCATTATTTTCTTTGTGATGTTAACAGCGTTTTT
AACATCCGTTTTGATTACATATGGTCTGTTAAAAGATACGAGCCAGACGGTTCAGGATACGAAATCGAAAAATGAAACGG
CCGTTCAGTCGGCAAAGCTGATGTCCCTATATCAAAATAAATATTTGCACATTCCGGAGTACATCATAAACGCCCAGGAT
GAAAAGCTGACCGATTATATGAAGTACAGCCAGGAATTTGCCGATACGGCCAAAAAGCTGAAAAAAGAGCTGCATTCGGA
TGAGCAGCTTGACATGTTCGATCAAATCATTGAAAACAATCATTCACTGGATGAGTACTTTTTCAGCGAAATTGTTCCCA
ACGTGCAGCAAATCAACACCGAGAAATTTTTAACCCTTCAGAAAAAAGCGAACAAGCTCAAAGAGGAGACGATGACGTTA
GGCGAAAGCTTGAAAGAAAACGCTGTCAAAACCAATGTTGAGTCAATTGGACAAGCCCAATCCAATATGACGAAAACCAT
TTATATTTTAGGCGTCTCAATTCTGATTTCGGCGATTGTGTCGGCGGGACTCCTGATCATTGTCAGCCGGCAGATCAAGA
AAAATCTGAAGCGTGTTGTGGCAGCAAGCGAAGAAATTGCAAAGGGTCATTTGAACTTTGAAGCCCTTGATTACAAAGGA
AAAGATGAAATCGGCCAGCTTTCGCAAGCGGTGAATCATATGGGCGGAAGCCTGCGTGAGATGATCGTCGAAGTATCAGG
GATCGCAGCCGAAGTCGACAAGCAATGTCTTACGTTTACGAGCGTCTCGGCTGATGTCAGAGAAGGAAGCGAACAGATCG
CTGTCACCGTTGAAGAATTGGCAAACGGGGCCACGAATCAGGCAAATGAAGCAGCTAATATTTCCGAGCAGACACAGGAG
CTCACCGGGCAAATTCAGCACGCTCATGAAAGCGGCGAAACGCTGGCCCGGTTTTCAAAAGAAGTGCTTCACGTGTCTGT
CGACGGCGACAAACAGATGGCTCAATCATTGGAGCAAATGAATGTCATCAATCATGTAATGGAAGCATCCGTAGAAAAAG
TCAGTGTGCTGGAGGAACAGACACAGTCAATCCACAAGCTTGTCGAAATGATAACAGGTATGGCCGAACAAACGAATTTG
CTCGCATTAAACGCGTCCATAGAAGCGGCAAGGGCCGGCGACGCCGGAAAAGGGTTTGCCGTTGTAGCCGGCGAGGTGAA
AAGACTGGCTGAAGAAGTGAAAAGCTCTGTCGGCAGCATCACCGAAATCGTCACGGCGATTCAAACCGAAACATCTTCCA
TGGCCGGTGATTTAAAAACCGGTTTTTCAGAAGTTCATAAAGGAAAAAACCAGATTGAGACTTCCGGCCGATACTTTTCA
GAGATTAAAAATAAAGTGACGGATATGGCTGGCCGTGTATCGGACATTTCGGAGGCATTATCGCATTTCAGACGTTCAAG
CGAGGAGATTAACGGCTCGGTCGAGCATATCGCGGCGATTTCCGAAGAAAGCGCGGCCGGTTCTGAAGAAATTTCAGCGT
CCGTACATGAGCAAAGCGGCTCGATTGAAAAGATGGACGAAAGCGCAAGGCTTCTGGGAGAGATGGTTGAACGGATGAAT
GTGATGATCAAACGGTTTAAGCTCTGA

Upstream 100 bases:

>100_bases
CTCTTGTAAACAAGGTCTTTATCACTATATTTTTGTAAAAAAGTATCAGCTGCCGCCGATATAAATAAAAACTACTTTGT
TTGGAAGAAGGGGGAGCAAT

Downstream 100 bases:

>100_bases
TGCCGATACAGAATGGGGGGTTTTAATGTTGTCGATATATGTGAAAAGAGGGCTGTTGGCACTTGCGCTGTTCAGTCTCC
TCACAGCTGTTGCCGGGTGC

Product: YvaQ

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLITYGLLKDTSQTVQDTKSKNETAVQSAKLMSLYQNKYLHIPEYIINAQD
EKLTDYMKYSQEFADTAKKLKKELHSDEQLDMFDQIIENNHSLDEYFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTL
GESLKENAVKTNVESIGQAQSNMTKTIYILGVSILISAIVSAGLLIIVSRQIKKNLKRVVAASEEIAKGHLNFEALDYKG
KDEIGQLSQAVNHMGGSLREMIVEVSGIAAEVDKQCLTFTSVSADVREGSEQIAVTVEELANGATNQANEAANISEQTQE
LTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQMNVINHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNL
LALNASIEAARAGDAGKGFAVVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGFSEVHKGKNQIETSGRYFS
EIKNKVTDMAGRVSDISEALSHFRRSSEEINGSVEHIAAISEESAAGSEEISASVHEQSGSIEKMDESARLLGEMVERMN
VMIKRFKL

Sequences:

>Translated_568_residues
MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLITYGLLKDTSQTVQDTKSKNETAVQSAKLMSLYQNKYLHIPEYIINAQD
EKLTDYMKYSQEFADTAKKLKKELHSDEQLDMFDQIIENNHSLDEYFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTL
GESLKENAVKTNVESIGQAQSNMTKTIYILGVSILISAIVSAGLLIIVSRQIKKNLKRVVAASEEIAKGHLNFEALDYKG
KDEIGQLSQAVNHMGGSLREMIVEVSGIAAEVDKQCLTFTSVSADVREGSEQIAVTVEELANGATNQANEAANISEQTQE
LTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQMNVINHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNL
LALNASIEAARAGDAGKGFAVVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGFSEVHKGKNQIETSGRYFS
EIKNKVTDMAGRVSDISEALSHFRRSSEEINGSVEHIAAISEESAAGSEEISASVHEQSGSIEKMDESARLLGEMVERMN
VMIKRFKL
>Mature_568_residues
MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLITYGLLKDTSQTVQDTKSKNETAVQSAKLMSLYQNKYLHIPEYIINAQD
EKLTDYMKYSQEFADTAKKLKKELHSDEQLDMFDQIIENNHSLDEYFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTL
GESLKENAVKTNVESIGQAQSNMTKTIYILGVSILISAIVSAGLLIIVSRQIKKNLKRVVAASEEIAKGHLNFEALDYKG
KDEIGQLSQAVNHMGGSLREMIVEVSGIAAEVDKQCLTFTSVSADVREGSEQIAVTVEELANGATNQANEAANISEQTQE
LTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQMNVINHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNL
LALNASIEAARAGDAGKGFAVVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGFSEVHKGKNQIETSGRYFS
EIKNKVTDMAGRVSDISEALSHFRRSSEEINGSVEHIAAISEESAAGSEEISASVHEQSGSIEKMDESARLLGEMVERMN
VMIKRFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=28.4375, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI2367378, Length=388, Percent_Identity=25.7731958762887, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=369, Percent_Identity=26.2872628726287, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787690, Length=374, Percent_Identity=24.8663101604278, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788194, Length=370, Percent_Identity=22.972972972973, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62491; Mature: 62491

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLITYGLLKDTSQTVQDTKSKNETAVQSAKL
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSLYQNKYLHIPEYIINAQDEKLTDYMKYSQEFADTAKKLKKELHSDEQLDMFDQIIENN
HHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
HSLDEYFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTLGESLKENAVKTNVESIGQAQ
CCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNMTKTIYILGVSILISAIVSAGLLIIVSRQIKKNLKRVVAASEEIAKGHLNFEALDYKG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KDEIGQLSQAVNHMGGSLREMIVEVSGIAAEVDKQCLTFTSVSADVREGSEQIAVTVEEL
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHH
ANGATNQANEAANISEQTQELTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
NVINHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNLLALNASIEAARAGDAGKGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCHHHHCCCCCCCCHH
VVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGFSEVHKGKNQIETSGRYFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EIKNKVTDMAGRVSDISEALSHFRRSSEEINGSVEHIAAISEESAAGSEEISASVHEQSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
SIEKMDESARLLGEMVERMNVMIKRFKL
CHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLITYGLLKDTSQTVQDTKSKNETAVQSAKL
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSLYQNKYLHIPEYIINAQDEKLTDYMKYSQEFADTAKKLKKELHSDEQLDMFDQIIENN
HHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
HSLDEYFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTLGESLKENAVKTNVESIGQAQ
CCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNMTKTIYILGVSILISAIVSAGLLIIVSRQIKKNLKRVVAASEEIAKGHLNFEALDYKG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KDEIGQLSQAVNHMGGSLREMIVEVSGIAAEVDKQCLTFTSVSADVREGSEQIAVTVEEL
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHH
ANGATNQANEAANISEQTQELTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
NVINHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNLLALNASIEAARAGDAGKGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCHHHHCCCCCCCCHH
VVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGFSEVHKGKNQIETSGRYFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EIKNKVTDMAGRVSDISEALSHFRRSSEEINGSVEHIAAISEESAAGSEEISASVHEQSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
SIEKMDESARLLGEMVERMNVMIKRFKL
CHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]