Click here to switch to the map view.

The map label for this gene is qoxD [H]

Identifier: 52144611

GI number: 52144611

Start: 709238

End: 709549

Strand: Reverse

Name: qoxD [H]

Synonym: BCZK0611

Alternate gene names: 52144611

Gene position: 709549-709238 (Counterclockwise)

Preceding gene: 52144610

Following gene: 52144612

Centisome position: 13.39

GC content: 38.14

Gene sequence:

>312_bases
ATGGGTCAAAATAACAATCAAGCAAACGGGCATGCGCATAGCGGATTCCCTTGGTCACACGTTTTCGGATTTATTTTATC
GCTTGCACTAACGTTTCTAGCGTTATACGTGGCACTTTATACAAACCTGCCACTATCAACGATCTTAACTACCATTATCA
TAATGGCTGTTGCGCAAGCGTTGTTACAATTAATTATGTTCATGCATTTAAAAGAAGGAGAAGGAAGAGTTCAAGTTCTT
ACTATGATTTACAGTTTCTTCGTTGCAACTGCAACAGTTGGTTTAACTGTATGGATCTTCTTCTCAATGTAA

Upstream 100 bases:

>100_bases
AGCTCGTAAAGTATTCATTATCAGCTTATACTGGCATTTCCTTGATTTAGTTTGGGTCTTTATTTACACACTAGTTTACT
TGAACGGGATGGTGGCGTAA

Downstream 100 bases:

>100_bases
TGTACATGAAAAAGACTGCTGAGATTCCTCAGCAGTCTTTTTTTATTCCCTCCCCTATTACATCCACATTACGGAATTAA
CAACAGAATCATGAAAAATA

Product: quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV)

Products: ferricytochrome c; H2O

Alternate protein names: Quinol oxidase aa3-600, subunit qoxD; Quinol oxidase polypeptide IV [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIIMAVAQALLQLIMFMHLKEGEGRVQVL
TMIYSFFVATATVGLTVWIFFSM

Sequences:

>Translated_103_residues
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIIMAVAQALLQLIMFMHLKEGEGRVQVL
TMIYSFFVATATVGLTVWIFFSM
>Mature_102_residues
GQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIIMAVAQALLQLIMFMHLKEGEGRVQVLT
MIYSFFVATATVGLTVWIFFSM

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Major component for energy conversion during vegetative growth [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 11427; Mature: 11296

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIIMAVAQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLQLIMFMHLKEGEGRVQVLTMIYSFFVATATVGLTVWIFFSM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIIMAVAQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLQLIMFMHLKEGEGRVQVLTMIYSFFVATATVGLTVWIFFSM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7575098 [H]