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The map label for this gene is ypaA [H]

Identifier: 52143868

GI number: 52143868

Start: 1457979

End: 1458557

Strand: Direct

Name: ypaA [H]

Synonym: BCZK1363

Alternate gene names: 52143868

Gene position: 1457979-1458557 (Clockwise)

Preceding gene: 52143866

Following gene: 52143865

Centisome position: 27.5

GC content: 36.1

Gene sequence:

>579_bases
ATGAAACAAAAAAACAGTGTAGTGCAGATGGTGAGTGTAGCGATGCTAAGTAGTATTGCATATTTACTGATGATGTTGGA
TTTCCCATTCCCAGGGCTTCCGCCATTTTTAAAAATTGATTTTAGTGATGTACCAGCTCTAATTGCTGCAATTATTTTCG
GGCCGGTTGCAGGGATAATTGTAGAAGCGATAAAGAATATTTTACATTACGGGATTCAAGGGAGTTTAACGGGAGTACCA
GTTGGAGAAATTGCTAACTTTATTGCAGGATGTTTATTTATTGGACCGGCAGCTTTCTTATTTAGGAAGTATCGTACTGT
TAAGAGTTTAACGACAGGATTAATGCTAGGGACAATTACAATGGCTCTTATTATGAGCGTATTAAATTACATTATCATAT
TCCCAGCTTACACTTGGTTTTTAAATTCACCAGCTATGTCTAGCGAAGCGATAAAAACAACGGTTGTAACGGCAATCTTA
CCATTTAATTTGATTAAAGGAATTGTTGTGACAATTGTATTTGTAGCGTTATTCTCACGCCTGAAAGTATGGGTGTTTGC
AAAAATGAAAAATGCATAA

Upstream 100 bases:

>100_bases
TTGTGTAAAACACAAAGGGTTTTTTCGTTCTATGAAAAAGTAGGCATAGCAGAACCTTTCCACTTTCCATGAGATGATCG
ATGGAAAAGGAGAGAGAAAG

Downstream 100 bases:

>100_bases
AATATAAAATAAAACCATTAGTAGTATGTAACTACTAATGGTTTTTTAATAAGGAGAATGAAAATAGAAAACAAAAAATA
CCCCTCAAAGGAATGAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: FMN permease [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKQKNSVVQMVSVAMLSSIAYLLMMLDFPFPGLPPFLKIDFSDVPALIAAIIFGPVAGIIVEAIKNILHYGIQGSLTGVP
VGEIANFIAGCLFIGPAAFLFRKYRTVKSLTTGLMLGTITMALIMSVLNYIIIFPAYTWFLNSPAMSSEAIKTTVVTAIL
PFNLIKGIVVTIVFVALFSRLKVWVFAKMKNA

Sequences:

>Translated_192_residues
MKQKNSVVQMVSVAMLSSIAYLLMMLDFPFPGLPPFLKIDFSDVPALIAAIIFGPVAGIIVEAIKNILHYGIQGSLTGVP
VGEIANFIAGCLFIGPAAFLFRKYRTVKSLTTGLMLGTITMALIMSVLNYIIIFPAYTWFLNSPAMSSEAIKTTVVTAIL
PFNLIKGIVVTIVFVALFSRLKVWVFAKMKNA
>Mature_192_residues
MKQKNSVVQMVSVAMLSSIAYLLMMLDFPFPGLPPFLKIDFSDVPALIAAIIFGPVAGIIVEAIKNILHYGIQGSLTGVP
VGEIANFIAGCLFIGPAAFLFRKYRTVKSLTTGLMLGTITMALIMSVLNYIIIFPAYTWFLNSPAMSSEAIKTTVVTAIL
PFNLIKGIVVTIVFVALFSRLKVWVFAKMKNA

Specific function: Mediates riboflavin uptake, probably via a proton- symport mechanism. Can also transport roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 20884; Mature: 20884

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKNSVVQMVSVAMLSSIAYLLMMLDFPFPGLPPFLKIDFSDVPALIAAIIFGPVAGII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
VEAIKNILHYGIQGSLTGVPVGEIANFIAGCLFIGPAAFLFRKYRTVKSLTTGLMLGTIT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALIMSVLNYIIIFPAYTWFLNSPAMSSEAIKTTVVTAILPFNLIKGIVVTIVFVALFSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKVWVFAKMKNA
HHHHHHHHHCCC
>Mature Secondary Structure
MKQKNSVVQMVSVAMLSSIAYLLMMLDFPFPGLPPFLKIDFSDVPALIAAIIFGPVAGII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
VEAIKNILHYGIQGSLTGVPVGEIANFIAGCLFIGPAAFLFRKYRTVKSLTTGLMLGTIT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALIMSVLNYIIIFPAYTWFLNSPAMSSEAIKTTVVTAILPFNLIKGIVVTIVFVALFSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKVWVFAKMKNA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]