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The map label for this gene is ypbB [H]

Identifier: 52143865

GI number: 52143865

Start: 1459197

End: 1460258

Strand: Direct

Name: ypbB [H]

Synonym: BCZK1365

Alternate gene names: 52143865

Gene position: 1459197-1460258 (Clockwise)

Preceding gene: 52143868

Following gene: 52143863

Centisome position: 27.53

GC content: 32.96

Gene sequence:

>1062_bases
ATGCAACTACAATATACTGTATTGTATTGTTTAAAACAATTGAATGGTGAAAGGACCGTTTCTTCTATTTATTATTTATT
AAAGGGAAAACGTTCTTCGCAAACGTTACAAGATGGAAATATGTTCCGAATTTCTTTTTTGTTTGGAATATATAAATCCC
TAAATAGAGCTGAATATGATCGTGAAGTTGCAAAGTTGTTGCAAGCAGATTTGATTCAAGAGATACATGAAAATACATAT
TTGTTAACACCTAAAGGTAAAATGCAGTTACATACATGGGAGGAAGGGTATGCTTTTCCAGCGCATTTACATGGTTTGCA
CTATGGTGAATTAGGTGAAACATTTTGGAAAAGATTATCCTTAATTATTCAAACTATATCTAATTTACAACAGAATAATA
CGAAGTTTATTCCTATTCAACAAGATACAGAAATAATGGTTTGGGTGAAACGCTTTTTAACAGGTATGCCGTATAGGCGA
AGTGAATTGGCAAAAAGATTATGGAAAGAAATACATACTCTTTTAAGAAAATGTGATGTGGTAGAAGCGACGATTGTAAC
ATATAGATTAACAGGGTATGAACGTATCGGTTGTACATTGCAGCAGTTAGCAGAAATTACGAAACGAGATGTTTTCAGGG
TGTACTTTTTATTTTGGGGTACAATTCATTTCCTTATACAAGAAGTTCGCGATTATGAAAATGAATTTCCATTATTAGCT
GAGATTATCTCTTATCCAAATGAGAGAGCTGAATTATTTAGTTTATCAACGAAAAAAACATATAATTTTTGGAGGCAAGG
GCGCTCATTAGAAGAAATAGCGACAATTAGAAATCTAAAGGTTGCAACGATAGAAGATCATTTTGTTGAAATTGCTTTGC
GAGAAAGAGATTTTTCAATCGAGATGTTTATGGAAAAAGACAAAATAGATAAAGTAACAGAAGTAATTGATGCATTACAA
ACACGTAAGCTGCGTGAGTTGAAACAAGCGGTTGGAGAGGATATCTCTTATTTTGAAGTTCGTCTTGTATTGGCGCGGAT
GGAGGGTATAAATGAAACTTGA

Upstream 100 bases:

>100_bases
AATGTTATTTCGTTTGGTACAATAGAATATATACAAGTACATATTGCCAATATGATAAGTTTAATGAGTAACTAAGTTAG
ATTGAAAGGTGGAAGCGGTA

Downstream 100 bases:

>100_bases
GGAATATTTATATAGGTGGTTTGGATATTCTGAATTTCGTCCAGGTCAAAAAGGAGTCATCACAGATTTATTGGAAGGAA
AAGATGTTATAGCGATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MQLQYTVLYCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRAEYDREVAKLLQADLIQEIHENTY
LLTPKGKMQLHTWEEGYAFPAHLHGLHYGELGETFWKRLSLIIQTISNLQQNNTKFIPIQQDTEIMVWVKRFLTGMPYRR
SELAKRLWKEIHTLLRKCDVVEATIVTYRLTGYERIGCTLQQLAEITKRDVFRVYFLFWGTIHFLIQEVRDYENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALRERDFSIEMFMEKDKIDKVTEVIDALQ
TRKLRELKQAVGEDISYFEVRLVLARMEGINET

Sequences:

>Translated_353_residues
MQLQYTVLYCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRAEYDREVAKLLQADLIQEIHENTY
LLTPKGKMQLHTWEEGYAFPAHLHGLHYGELGETFWKRLSLIIQTISNLQQNNTKFIPIQQDTEIMVWVKRFLTGMPYRR
SELAKRLWKEIHTLLRKCDVVEATIVTYRLTGYERIGCTLQQLAEITKRDVFRVYFLFWGTIHFLIQEVRDYENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALRERDFSIEMFMEKDKIDKVTEVIDALQ
TRKLRELKQAVGEDISYFEVRLVLARMEGINET
>Mature_353_residues
MQLQYTVLYCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRAEYDREVAKLLQADLIQEIHENTY
LLTPKGKMQLHTWEEGYAFPAHLHGLHYGELGETFWKRLSLIIQTISNLQQNNTKFIPIQQDTEIMVWVKRFLTGMPYRR
SELAKRLWKEIHTLLRKCDVVEATIVTYRLTGYERIGCTLQQLAEITKRDVFRVYFLFWGTIHFLIQEVRDYENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALRERDFSIEMFMEKDKIDKVTEVIDALQ
TRKLRELKQAVGEDISYFEVRLVLARMEGINET

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008308 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41871; Mature: 41871

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQYTVLYCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRAEYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
REVAKLLQADLIQEIHENTYLLTPKGKMQLHTWEEGYAFPAHLHGLHYGELGETFWKRLS
HHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHH
LIIQTISNLQQNNTKFIPIQQDTEIMVWVKRFLTGMPYRRSELAKRLWKEIHTLLRKCDV
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
VEATIVTYRLTGYERIGCTLQQLAEITKRDVFRVYFLFWGTIHFLIQEVRDYENEFPLLA
HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALRERDFSI
HHHHCCCCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCH
EMFMEKDKIDKVTEVIDALQTRKLRELKQAVGEDISYFEVRLVLARMEGINET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLQYTVLYCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRAEYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
REVAKLLQADLIQEIHENTYLLTPKGKMQLHTWEEGYAFPAHLHGLHYGELGETFWKRLS
HHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHH
LIIQTISNLQQNNTKFIPIQQDTEIMVWVKRFLTGMPYRRSELAKRLWKEIHTLLRKCDV
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
VEATIVTYRLTGYERIGCTLQQLAEITKRDVFRVYFLFWGTIHFLIQEVRDYENEFPLLA
HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALRERDFSI
HHHHCCCCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCH
EMFMEKDKIDKVTEVIDALQTRKLRELKQAVGEDISYFEVRLVLARMEGINET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]