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The map label for this gene is ctc [H]

Identifier: 52143605

GI number: 52143605

Start: 1714734

End: 1716146

Strand: Direct

Name: ctc [H]

Synonym: BCZK1629

Alternate gene names: 52143605

Gene position: 1714734-1716146 (Clockwise)

Preceding gene: 52143606

Following gene: 52143604

Centisome position: 32.35

GC content: 35.24

Gene sequence:

>1413_bases
ATGAAAAAAGTTATTTCTAATGTGTTAGCAGTGACAGTCGCACTTCAAGTAGTGATGGCTCCAGCAACTTCTTTTGCATC
TACAAAAGAATTTCCAGACGTTCCGAAAAATCATTGGGCACTTGAAGCGATTAATGATTTAACGTCAAAAGGGGTTATTG
CAGGTTACGATAATGGTAAATTTGGCTTTGGAGATGTTGTAACTCGTGAGCAAGTAGCAGCATTAATGTATCGCGCACTA
AAACCAGAGGTGAAAAGCGATTATAAAAATCCATACTCTGATATTAGTGCAGGAACGACGATGTTCCAAAAAGAAATCTT
GGCATTAACAGATATGGGAATTTTCGTAGGTGATGGTAAAGGAACGTTTAGACCGAAAGAATCATTAACACGTGCGGAGA
TGTCTGTTATTTTGCAAAAAGCATTTAAATTAGAAGTAAAAGCACCACATACATTTGATGATATAGATGCAACATATTGG
TGGGCAAAGGAAGCAATTAGTGCATTGCAATCTAATGGTGTAGCGGCAGGGAATGGACTTGGGGGATTTGATCCATCAGG
TGTATTAACGCGTGAAGGCTATGCACAATTATTATATAAAGCGATGCAAATAAAAAAGGATGTTCCTGTTGAACAACCAT
CATATATGAATCTAGATGTGACATTGCCATCTAACATAACGGCACAGGAGATTGATGGATTTATTAAAGAATGGCACCCT
GACAGTCCGCTTATTGGAACTGGACAAGATTTTATTCAAGCACAAAATGAGTATGGTGTGAGCGCATTATACTTAGCTGC
ACATGCAATTTTAGAATCTGGTTACGGTAAATCAGAAATTGCATATCGTAAACATAATTTATTTGGTTTAAGAGCATATG
ATCGCGATCCATTTGCATACGCAAAATATTTACCATCATACAAGGACAGTATTTCTTACAATGCTGATTATGTAAGAAAG
AATTACTTAGAAAAAGGTGCTGATCATTTTAATGGTTACACATTGCCTGCTATGAATATTAAGTATGCAACAGATAAAGA
ATGGGCTGGCAAAATCGCTAATCTTATGGAGCGTATTAAACCGTTTAACAAAAAAGATTATGAAAATGTAAAACGATTAC
CAAAGAATCCTAATACATTGAATGTAGAGGCATTAGGAAAAGAAATTCCATATAAAGATTATGCAAAAGATGCAACAGCT
ACTGTTCAATTAGTAGGCTCTTACTATCAAGTACCATATCCATTTGGCTATACAATTAAGAGTGTACCAAATATTACGCA
AAATGAAGTTGGAAAATTAGAAAGTGGCAAGAAAGTAAATGTATATCGTGAAGATCCAAACGGCTGGGTAGAATTTTCAT
TTGAAAACGCTCAAGAAAAATATTGGACATTGAAGAAGAACTTAAAAATATAA

Upstream 100 bases:

>100_bases
TTGACTATTTAAGAGTTTGTTAGTTTAATAGGGAAAATTATACGATAAAGGGAGGCAAGTTAACACGGGACAAGCATATA
CATAACGTGTTAAAAAAATT

Downstream 100 bases:

>100_bases
ATAAAAAAGGTGTTTTCACTTATGAAAACACCTTTTTTATTTATATTTAACATGTAATATTTTTAGATTCAGTATGAGTT
TCTTTTTTATGTTTTTACCA

Product: S-layer protein

Products: NA

Alternate protein names: Parasporal protein [H]

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKKVISNVLAVTVALQVVMAPATSFASTKEFPDVPKNHWALEAINDLTSKGVIAGYDNGKFGFGDVVTREQVAALMYRAL
KPEVKSDYKNPYSDISAGTTMFQKEILALTDMGIFVGDGKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYW
WAKEAISALQSNGVAAGNGLGGFDPSGVLTREGYAQLLYKAMQIKKDVPVEQPSYMNLDVTLPSNITAQEIDGFIKEWHP
DSPLIGTGQDFIQAQNEYGVSALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDRDPFAYAKYLPSYKDSISYNADYVRK
NYLEKGADHFNGYTLPAMNIKYATDKEWAGKIANLMERIKPFNKKDYENVKRLPKNPNTLNVEALGKEIPYKDYAKDATA
TVQLVGSYYQVPYPFGYTIKSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI

Sequences:

>Translated_470_residues
MKKVISNVLAVTVALQVVMAPATSFASTKEFPDVPKNHWALEAINDLTSKGVIAGYDNGKFGFGDVVTREQVAALMYRAL
KPEVKSDYKNPYSDISAGTTMFQKEILALTDMGIFVGDGKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYW
WAKEAISALQSNGVAAGNGLGGFDPSGVLTREGYAQLLYKAMQIKKDVPVEQPSYMNLDVTLPSNITAQEIDGFIKEWHP
DSPLIGTGQDFIQAQNEYGVSALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDRDPFAYAKYLPSYKDSISYNADYVRK
NYLEKGADHFNGYTLPAMNIKYATDKEWAGKIANLMERIKPFNKKDYENVKRLPKNPNTLNVEALGKEIPYKDYAKDATA
TVQLVGSYYQVPYPFGYTIKSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
>Mature_470_residues
MKKVISNVLAVTVALQVVMAPATSFASTKEFPDVPKNHWALEAINDLTSKGVIAGYDNGKFGFGDVVTREQVAALMYRAL
KPEVKSDYKNPYSDISAGTTMFQKEILALTDMGIFVGDGKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYW
WAKEAISALQSNGVAAGNGLGGFDPSGVLTREGYAQLLYKAMQIKKDVPVEQPSYMNLDVTLPSNITAQEIDGFIKEWHP
DSPLIGTGQDFIQAQNEYGVSALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDRDPFAYAKYLPSYKDSISYNADYVRK
NYLEKGADHFNGYTLPAMNIKYATDKEWAGKIANLMERIKPFNKKDYENVKRLPKNPNTLNVEALGKEIPYKDYAKDATA
TVQLVGSYYQVPYPFGYTIKSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: COG4193

COG function: function code G; Beta- N-acetylglucosaminidase

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 52621; Mature: 52621

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVISNVLAVTVALQVVMAPATSFASTKEFPDVPKNHWALEAINDLTSKGVIAGYDNGK
CHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCC
FGFGDVVTREQVAALMYRALKPEVKSDYKNPYSDISAGTTMFQKEILALTDMGIFVGDGK
CCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGNGL
CCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GGFDPSGVLTREGYAQLLYKAMQIKKDVPVEQPSYMNLDVTLPSNITAQEIDGFIKEWHP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCC
DSPLIGTGQDFIQAQNEYGVSALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDRDPFAY
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHEECCCEEEEEECCCCCHHH
AKYLPSYKDSISYNADYVRKNYLEKGADHFNGYTLPAMNIKYATDKEWAGKIANLMERIK
HHHCCCHHHCCCCCHHHHHHHHHHHCHHHCCCEECCCCEEEECCCHHHHHHHHHHHHHHC
PFNKKDYENVKRLPKNPNTLNVEALGKEIPYKDYAKDATATVQLVGSYYQVPYPFGYTIK
CCCCCCHHHHHHCCCCCCEEEHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
SVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
CCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKKVISNVLAVTVALQVVMAPATSFASTKEFPDVPKNHWALEAINDLTSKGVIAGYDNGK
CHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCC
FGFGDVVTREQVAALMYRALKPEVKSDYKNPYSDISAGTTMFQKEILALTDMGIFVGDGK
CCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGNGL
CCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GGFDPSGVLTREGYAQLLYKAMQIKKDVPVEQPSYMNLDVTLPSNITAQEIDGFIKEWHP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCC
DSPLIGTGQDFIQAQNEYGVSALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDRDPFAY
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHEECCCEEEEEECCCCCHHH
AKYLPSYKDSISYNADYVRKNYLEKGADHFNGYTLPAMNIKYATDKEWAGKIANLMERIK
HHHCCCHHHCCCCCHHHHHHHHHHHCHHHCCCEECCCCEEEECCCHHHHHHHHHHHHHHC
PFNKKDYENVKRLPKNPNTLNVEALGKEIPYKDYAKDATATVQLVGSYYQVPYPFGYTIK
CCCCCCHHHHHHCCCCCCEEEHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
SVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
CCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA