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The map label for this gene is 52143271

Identifier: 52143271

GI number: 52143271

Start: 2079885

End: 2080475

Strand: Reverse

Name: 52143271

Synonym: BCZK1968

Alternate gene names: NA

Gene position: 2080475-2079885 (Counterclockwise)

Preceding gene: 52143268

Following gene: 52143274

Centisome position: 39.25

GC content: 32.66

Gene sequence:

>591_bases
ATGCTTAGAGAAACGAGAAAAAAAGAGTTAAAGGAACTTATATTTCTAAAAGCAGTACAGCTCTTTCAAGAACGCGGGTA
CGAAAATGTAACGGTTCAAGATATTACTACTGCATGTGGGATAGCGAAGGGCACTTTCTTCAACTACTTTCCGAAAAAGG
AAAACATATTATTATTTTTAGGTGATTCTCAAATTGAGCTATGGAATGAAAGTTTAAAAACTTACGAAAATGTGGAACAT
CCAAAAGAAAGAATCAAACTTGTTTTAGGCGATTTACTGGATCGATTTACTGGACATGGTGATTTAATGAAGCATGCCGT
CTTTGAGATTATAAAGTCAAACTACTTAGTAGAAAATGAATTAAAAAGTATACAACAGCTACAAGAAGGGTTGTCTTCAA
TTATTACAGAAGCGAAAGAGGCAGGAAAATTAAACAGTCAATGGGATATAAATATTATCACTTCTACTGTTATGAGCACT
TATTTTTATACACTAATGTCGCATTCGCTACTACATGGAAATGAAATCAATGCGAAAAATATTCTCAATCAACAATTAGA
TGTTGTTTGGGAAGGTATTAATCAAAAGTGA

Upstream 100 bases:

>100_bases
ATGTAACTATAATGAAAACTATAAACAGAATTATGACGTAAGATTCTATTTGAGATTATCTCTTAAACAGATATAATTGT
TTTTGTTAGGAGTAGATAAA

Downstream 100 bases:

>100_bases
TAGAGGGCTATGTTACTAGACCCTCTTATTGCGATGCACCTTCGCGCCTTCTCTCCAAAAATGTAATGCTCTCAATCACG
ACTTCCGTTATATATATTCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NADH Dehydrogenase; Transcriptional Regulator TetR Family; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLRETRKKELKELIFLKAVQLFQERGYENVTVQDITTACGIAKGTFFNYFPKKENILLFLGDSQIELWNESLKTYENVEH
PKERIKLVLGDLLDRFTGHGDLMKHAVFEIIKSNYLVENELKSIQQLQEGLSSIITEAKEAGKLNSQWDINIITSTVMST
YFYTLMSHSLLHGNEINAKNILNQQLDVVWEGINQK

Sequences:

>Translated_196_residues
MLRETRKKELKELIFLKAVQLFQERGYENVTVQDITTACGIAKGTFFNYFPKKENILLFLGDSQIELWNESLKTYENVEH
PKERIKLVLGDLLDRFTGHGDLMKHAVFEIIKSNYLVENELKSIQQLQEGLSSIITEAKEAGKLNSQWDINIITSTVMST
YFYTLMSHSLLHGNEINAKNILNQQLDVVWEGINQK
>Mature_196_residues
MLRETRKKELKELIFLKAVQLFQERGYENVTVQDITTACGIAKGTFFNYFPKKENILLFLGDSQIELWNESLKTYENVEH
PKERIKLVLGDLLDRFTGHGDLMKHAVFEIIKSNYLVENELKSIQQLQEGLSSIITEAKEAGKLNSQWDINIITSTVMST
YFYTLMSHSLLHGNEINAKNILNQQLDVVWEGINQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22654; Mature: 22654

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRETRKKELKELIFLKAVQLFQERGYENVTVQDITTACGIAKGTFFNYFPKKENILLFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE
GDSQIELWNESLKTYENVEHPKERIKLVLGDLLDRFTGHGDLMKHAVFEIIKSNYLVENE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LKSIQQLQEGLSSIITEAKEAGKLNSQWDINIITSTVMSTYFYTLMSHSLLHGNEINAKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ILNQQLDVVWEGINQK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRETRKKELKELIFLKAVQLFQERGYENVTVQDITTACGIAKGTFFNYFPKKENILLFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE
GDSQIELWNESLKTYENVEHPKERIKLVLGDLLDRFTGHGDLMKHAVFEIIKSNYLVENE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LKSIQQLQEGLSSIITEAKEAGKLNSQWDINIITSTVMSTYFYTLMSHSLLHGNEINAKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ILNQQLDVVWEGINQK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA