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The map label for this gene is xlnD [H]

Identifier: 52143268

GI number: 52143268

Start: 2080577

End: 2081710

Strand: Reverse

Name: xlnD [H]

Synonym: BCZK1969

Alternate gene names: 52143268

Gene position: 2081710-2080577 (Counterclockwise)

Preceding gene: 52143258

Following gene: 52143271

Centisome position: 39.27

GC content: 35.01

Gene sequence:

>1134_bases
ATGAATAATGTCATAATTATTGGTGGCGGCATTGCTGGTCTATGTGCAGCAATTTCCTTACAAAAAATAGGATTAGATGT
AAAAGTATATGACAAAAATACTGAACCTACTGTTGCTGGTGCGGGTATTATCATTGCCCCAAACGCAATGCAAGCACTTG
AACTATACGGCATTTCTAAGAAAATCAAAAAATTCGGCAACGAAAGTAACGGTTTTAACCTTGTATCCGAAAAAGGTACT
ACTTTCAATAAGTTAATTATTCCAACTTGCTATCCAAAAATGTACTCCATTCATAGAAAAGATTTACACCAATTACTACT
TTCTGAACTAAAAGAAGATACTGTCAAGTGGGGAAAAGAATGCGTAAAAATAGAACAGAATGAAGCAAACGCCTTAAAAA
TAGTATTTCAAGATGGTAGTGAAGCACTCGGTAATATACTCATTGCGGCTGATGGTATTCATTCTGTCATTCGAAAACAA
GTAACACAAGGCGATAATTATCGTTATGCAGGATATACGTGTTGGCGCGGCGTAACTCCTGCTAATAATCTTTCTTTAAC
AAATGATTTTATTGAAACTTGGGGAACAAACGGTAGATTTGGTATCGTCCCTCTTCCTAACAACGAAGTATACTGGTATG
CGCTAATAAATGCTAAAGCTAGAGATCCAAAATACAAAGCTTACACAACAACAGATTTATATAATCATTTCAAAACTTAC
CACAATCCAATCCCATCTATTTTAAAGAACGCATCGGACATTGATATGATTCATCGTGATATTATAGACATCACTCCAAT
GAAACAGTTTTTTGACAAACGCATCGTATTCATTGGGGATGCTGCCCATGCACTTACTCCGAATTTAGGCCAAGGTGCTT
GCCAAGCAATTGAAGATGCGATTATTCTGGCTGAATGCATTAAAAATAATGCTCATTATCGTCAAGCATTTTTAGAATAC
GAACAAAAACGACGAGATAGAATTGAAAAAATCTCAAATACTGCATGGAAAGTTGGAAAAATGGCACAAATAGAAAATAA
ACCTTTAACTCTAGTAAGAAACGAAGTAATGAAACGTATGCCAAAATGGGTTTCTGAAAAGCGAACACATGAACTATATA
GTTTTCATTTATAA

Upstream 100 bases:

>100_bases
AAGTATAATTGACAATTACATAAAAAGGGATTAACCTTAACTCATAAAATGACCTCGGTCATTTTATGAACAAAGTCATT
CAAAGGTGGAGTGATAATAA

Downstream 100 bases:

>100_bases
CATGTAACTATAATGAAAACTATAAACAGAATTATGACGTAAGATTCTATTTGAGATTATCTCTTAAACAGATATAATTG
TTTTTGTTAGGAGTAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNNVIIIGGGIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESNGFNLVSEKGT
TFNKLIIPTCYPKMYSIHRKDLHQLLLSELKEDTVKWGKECVKIEQNEANALKIVFQDGSEALGNILIAADGIHSVIRKQ
VTQGDNYRYAGYTCWRGVTPANNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTY
HNPIPSILKNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAHYRQAFLEY
EQKRRDRIEKISNTAWKVGKMAQIENKPLTLVRNEVMKRMPKWVSEKRTHELYSFHL

Sequences:

>Translated_377_residues
MNNVIIIGGGIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESNGFNLVSEKGT
TFNKLIIPTCYPKMYSIHRKDLHQLLLSELKEDTVKWGKECVKIEQNEANALKIVFQDGSEALGNILIAADGIHSVIRKQ
VTQGDNYRYAGYTCWRGVTPANNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTY
HNPIPSILKNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAHYRQAFLEY
EQKRRDRIEKISNTAWKVGKMAQIENKPLTLVRNEVMKRMPKWVSEKRTHELYSFHL
>Mature_377_residues
MNNVIIIGGGIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESNGFNLVSEKGT
TFNKLIIPTCYPKMYSIHRKDLHQLLLSELKEDTVKWGKECVKIEQNEANALKIVFQDGSEALGNILIAADGIHSVIRKQ
VTQGDNYRYAGYTCWRGVTPANNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTY
HNPIPSILKNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAHYRQAFLEY
EQKRRDRIEKISNTAWKVGKMAQIENKPLTLVRNEVMKRMPKWVSEKRTHELYSFHL

Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17562934, Length=345, Percent_Identity=22.6086956521739, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.24 [H]

Molecular weight: Translated: 42580; Mature: 42580

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVIIIGGGIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISK
CCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCEECCCEEECCCHHHHHHHHHHHH
KIKKFGNESNGFNLVSEKGTTFNKLIIPTCYPKMYSIHRKDLHQLLLSELKEDTVKWGKE
HHHHCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKIEQNEANALKIVFQDGSEALGNILIAADGIHSVIRKQVTQGDNYRYAGYTCWRGVTP
HHEEECCCCCEEEEEEECCCHHHCCEEEEECHHHHHHHHHHHCCCCEEECCEEEECCCCC
ANNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTY
CCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHH
HNPIPSILKNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDA
CCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEECCHHHCCCCCCHHHHHHHHHH
IILAECIKNNAHYRQAFLEYEQKRRDRIEKISNTAWKVGKMAQIENKPLTLVRNEVMKRM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHH
PKWVSEKRTHELYSFHL
HHHHHHHHHHHHHEECC
>Mature Secondary Structure
MNNVIIIGGGIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISK
CCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCEECCCEEECCCHHHHHHHHHHHH
KIKKFGNESNGFNLVSEKGTTFNKLIIPTCYPKMYSIHRKDLHQLLLSELKEDTVKWGKE
HHHHCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKIEQNEANALKIVFQDGSEALGNILIAADGIHSVIRKQVTQGDNYRYAGYTCWRGVTP
HHEEECCCCCEEEEEEECCCHHHCCEEEEECHHHHHHHHHHHCCCCEEECCEEEECCCCC
ANNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTY
CCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHH
HNPIPSILKNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDA
CCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEECCHHHCCCCCCHHHHHHHHHH
IILAECIKNNAHYRQAFLEYEQKRRDRIEKISNTAWKVGKMAQIENKPLTLVRNEVMKRM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHH
PKWVSEKRTHELYSFHL
HHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12909360 [H]