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The map label for this gene is 52142681

Identifier: 52142681

GI number: 52142681

Start: 2681457

End: 2682398

Strand: Reverse

Name: 52142681

Synonym: BCZK2558

Alternate gene names: NA

Gene position: 2682398-2681457 (Counterclockwise)

Preceding gene: 52142682

Following gene: 52142683

Centisome position: 50.6

GC content: 32.7

Gene sequence:

>942_bases
ATGAACATTCAAAAAATGTATACAGCAGTAGACGTACACGTAAATGGCGAGGCATTCCGTGTAGTCAAAGATGTACCATG
CAAGTACTACTACAATTTAGAACAATTAAACGAACAATTTTCAGGTGAATTAGCAGAAGAAATGCAGCTTTTATTAAATG
AACCGCGTGGTTTTATCGGTTTAAATGGATGTATCGTCGTTCCTTCTATTCATACGGAAGTTGATGCAGCTGTATTATTT
TTTAATCATGAAGGGTCAATCCCTCTTCATTACGCAGGTATTGTCGCAGTCATAACGATGTTACTAGAAAGCGGGTATTT
AAAAAAGAGAGAGACGAATCAATACAAAATCGAAACGTTATCTGGCATATTTTCAGTCCATGCGTATGTAGAGAATGATG
AAGTTGTATCTGTTTCGTTTGAAAGTAAACTATGTTATTTGATTGAGAAAAATTTACAAGTTGAAAATATAAGTTACTCT
CTCATACAGGCAGATAAAGTATATGCAGTTGTAGAAAAAGATGCGTATTCACCAGAAATTCATATTGAAAACATTTCTGA
ATTGAAAAAATGGGGAGAAAGTACACTACAAGCTATACAAAAACAGTTGTTAATAAACAGGCTTATTTTAGTAGATTCTT
CGCAAAAAGAAAAGAACCATATAAAGTCAATTACCTTTCATGAAGATAACTTTATTGTAAGATCGCCAGGTTTTGTTTCT
ACTATTGTGTCTTATGTTCATGCGTTATTTAAAAATGACTATATGGCGGATAAACCTTTTATAAATGAAAGTATATGTAA
TAGTTTTATAACAGTTGAAAAAGTGAAAAGGGAAGAAACGGGTTACATTTTCCGTTTTGAAAGTAGAGGTTTTATTACAG
GGGTGCAGACATTTCTACTAGACCCTACAGATCCATTTCCAGCAGGATTTTTATTAAAATAA

Upstream 100 bases:

>100_bases
GGCTTATGGGGATGCATAGATTTTTTTACAATGAAAAGGATCCACTGAAAGAAGGATTTTTGCTAATTCCGCCGATGGAA
CATGAAACGGAGGATGTAAA

Downstream 100 bases:

>100_bases
AATGATAAAGGGAGAGATAAATATGAAAAAAATTCAAGGGGCATTTCCAGTATTAATCACACCAATGGATGAGTTTCAAG
AAATTAATTGGAACGGTGTA

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNIQKMYTAVDVHVNGEAFRVVKDVPCKYYYNLEQLNEQFSGELAEEMQLLLNEPRGFIGLNGCIVVPSIHTEVDAAVLF
FNHEGSIPLHYAGIVAVITMLLESGYLKKRETNQYKIETLSGIFSVHAYVENDEVVSVSFESKLCYLIEKNLQVENISYS
LIQADKVYAVVEKDAYSPEIHIENISELKKWGESTLQAIQKQLLINRLILVDSSQKEKNHIKSITFHEDNFIVRSPGFVS
TIVSYVHALFKNDYMADKPFINESICNSFITVEKVKREETGYIFRFESRGFITGVQTFLLDPTDPFPAGFLLK

Sequences:

>Translated_313_residues
MNIQKMYTAVDVHVNGEAFRVVKDVPCKYYYNLEQLNEQFSGELAEEMQLLLNEPRGFIGLNGCIVVPSIHTEVDAAVLF
FNHEGSIPLHYAGIVAVITMLLESGYLKKRETNQYKIETLSGIFSVHAYVENDEVVSVSFESKLCYLIEKNLQVENISYS
LIQADKVYAVVEKDAYSPEIHIENISELKKWGESTLQAIQKQLLINRLILVDSSQKEKNHIKSITFHEDNFIVRSPGFVS
TIVSYVHALFKNDYMADKPFINESICNSFITVEKVKREETGYIFRFESRGFITGVQTFLLDPTDPFPAGFLLK
>Mature_313_residues
MNIQKMYTAVDVHVNGEAFRVVKDVPCKYYYNLEQLNEQFSGELAEEMQLLLNEPRGFIGLNGCIVVPSIHTEVDAAVLF
FNHEGSIPLHYAGIVAVITMLLESGYLKKRETNQYKIETLSGIFSVHAYVENDEVVSVSFESKLCYLIEKNLQVENISYS
LIQADKVYAVVEKDAYSPEIHIENISELKKWGESTLQAIQKQLLINRLILVDSSQKEKNHIKSITFHEDNFIVRSPGFVS
TIVSYVHALFKNDYMADKPFINESICNSFITVEKVKREETGYIFRFESRGFITGVQTFLLDPTDPFPAGFLLK

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 35718; Mature: 35718

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQKMYTAVDVHVNGEAFRVVKDVPCKYYYNLEQLNEQFSGELAEEMQLLLNEPRGFIG
CCHHHEEEEEEEEECCCEEEEEECCCCCEEECHHHHHHHHCCHHHHHHHHHHHCCCCEEE
LNGCIVVPSIHTEVDAAVLFFNHEGSIPLHYAGIVAVITMLLESGYLKKRETNQYKIETL
CCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHH
SGIFSVHAYVENDEVVSVSFESKLCYLIEKNLQVENISYSLIQADKVYAVVEKDAYSPEI
HHEEEEEEEECCCCEEEEEECCEEEEEEECCCEEECCEEEEEECCEEEEEEECCCCCCEE
HIENISELKKWGESTLQAIQKQLLINRLILVDSSQKEKNHIKSITFHEDNFIVRSPGFVS
EECCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHCCEEEEECCCEEEECCCHHH
TIVSYVHALFKNDYMADKPFINESICNSFITVEKVKREETGYIFRFESRGFITGVQTFLL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHEEE
DPTDPFPAGFLLK
CCCCCCCCCCCCC
>Mature Secondary Structure
MNIQKMYTAVDVHVNGEAFRVVKDVPCKYYYNLEQLNEQFSGELAEEMQLLLNEPRGFIG
CCHHHEEEEEEEEECCCEEEEEECCCCCEEECHHHHHHHHCCHHHHHHHHHHHCCCCEEE
LNGCIVVPSIHTEVDAAVLFFNHEGSIPLHYAGIVAVITMLLESGYLKKRETNQYKIETL
CCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHH
SGIFSVHAYVENDEVVSVSFESKLCYLIEKNLQVENISYSLIQADKVYAVVEKDAYSPEI
HHEEEEEEEECCCCEEEEEECCEEEEEEECCCEEECCEEEEEECCEEEEEEECCCCCCEE
HIENISELKKWGESTLQAIQKQLLINRLILVDSSQKEKNHIKSITFHEDNFIVRSPGFVS
EECCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHCCEEEEECCCEEEECCCHHH
TIVSYVHALFKNDYMADKPFINESICNSFITVEKVKREETGYIFRFESRGFITGVQTFLL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHEEE
DPTDPFPAGFLLK
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]