Click here to switch to the map view.

The map label for this gene is yqjN [H]

Identifier: 52142528

GI number: 52142528

Start: 2831802

End: 2833442

Strand: Reverse

Name: yqjN [H]

Synonym: BCZK2714

Alternate gene names: 52142528

Gene position: 2833442-2831802 (Counterclockwise)

Preceding gene: 52142527

Following gene: 52142530

Centisome position: 53.45

GC content: 35.34

Gene sequence:

>1641_bases
ATGTCAAAGTGGCAATCAAAAGAACAATTGATTCAATTATTAAGCGGTCTTGTTGAAATTCCTAGTATTACAGGTACAGA
AGCTGAAGTGATATTGCCAGACTTCATTGTGGAACAATTATCTGATTTACAGTACTTCAAAGAAAATCCGCACCATTTGC
AAAAAAATCCGACAGGGGACGGAAGATATTTTGTTACAGCACTAGTAAAGAAAAGTGACCGTACAAAAAATACCGTAATT
TTAGTTAGTCACTTTGATGTTGTAGATGTGCAAGATTACGGAGTGTGGAAAGAAGATGCATTTAATCCTAAAAAGTTAAC
ATCTATGTTTTATTCTCATAAAGATGAATTACCAGACCATGTGCGTGAAGATATAGAACAAGGAGATTGGCTATTTGGTA
GAGGGACAATGGACATGAAATGCGGCCTCGCGTTACAAATGGCGATGATTGAGCAAGCTTGCGAAGGAAGGTTTGATGGG
AATGTTCTTTTATTGGCTGTACCAGATGAAGAAGTAAACTCTGTAGGGATGAGAGCTGCTGTTCCAAGATTACTAGAGCT
AGCAAGAGAACATGATTTAGATTATAAAACAGTACTAAATTCAGAGCCTATGTTTTCAAGGCATCCTGGTGACCAAAAGA
AATATATTTACACTGGTTCTATTGGTAAAGTGTTACCTGGTTTTCTTTGCTACGGAAAAGAGACACATGTAGGTGAACCT
TTTGCGGGCCTAAATGGGAGTTATATGGCTTCATTAATAACAGCAGAATTAGAGTTGAATACAGACCTTTGTGATATTGT
AGAAGGGGAAGCGAGTCCTCCGCCAACTAATTTACTTCAAAGGGACTTAAAGGAGGATTACTCTGTACAAATTCCGCATC
GTGCAGTCACATTATTTAATTTGTTTTTACTAGAAAAATCAATGACAGATGTCGTTTCATTGCTGCGTCAAAAAGTAACG
AAAGTAGCAGGAAAAATAGAAGAATCATATGAGAAGCAAGCTTATCGTTTTTCTAAATATAATCCATTTATACCACCTAA
CCTCAAAGTAAATGTATTAACGTATGAAGAGCTTATCGCATATGCAATTGAACAACATGGGCAGGAGAAAATAAATGAAA
TTCAATTTAGCATTATAAAAAATAGAGAAGATAAAGATGATCGTGCGGTAACGATTGATTTAGTAGATAAATTAGCCATC
TTATGTAAAGAAAAAGCACCGATGATTGTACTTTTCTTTGCTCCGCCATATTATCCAGCTGTAAGTTCACGCAACAACCA
ATTAATTAAAGAGGTAGTTGGAGAGATGGAAAAGTATGCAAACTTCAATCATAATATTTCATTTGAAAACCAAAACTATT
TTGGAGGAATTTCAGATTTAAGCTATGTGGGCTTACAAAATCCATTACATTCAATGAGTTCACTTGTAGACAATATGCCA
TTATGGGATAAAGGTTACTCAATTCCACTTCAGGAACTAGAAGAATTTGACGTTCCAGTATTAAATATGGGGCCGGTAGG
AAAAGATGCACATCAATGGACAGAACGTCTAGATGTAAATTACGCATTTGAAACGCTATTAGATATGTTACCGATTTGCA
TTGAAAAATTACTTGTTTCTAATAAAATTACACAAGTATAG

Upstream 100 bases:

>100_bases
AATCGGCAGTACATCAGAACTATAGTTTTGATAGCTGTCGTCATTTTTTATTCATATACTGGAATTCGTTTTCATAATAC
GGAAAAATAGGGGGATTTAT

Downstream 100 bases:

>100_bases
TAGGGAAGGGGAAAATGAAATTATTTTAATATAATTAACAACTAAAACGGCCAAACTCAAGTAAATTCGAGTTTGGCCGT
TTATCATGTAGTGCATTTCT

Product: M20 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MSKWQSKEQLIQLLSGLVEIPSITGTEAEVILPDFIVEQLSDLQYFKENPHHLQKNPTGDGRYFVTALVKKSDRTKNTVI
LVSHFDVVDVQDYGVWKEDAFNPKKLTSMFYSHKDELPDHVREDIEQGDWLFGRGTMDMKCGLALQMAMIEQACEGRFDG
NVLLLAVPDEEVNSVGMRAAVPRLLELAREHDLDYKTVLNSEPMFSRHPGDQKKYIYTGSIGKVLPGFLCYGKETHVGEP
FAGLNGSYMASLITAELELNTDLCDIVEGEASPPPTNLLQRDLKEDYSVQIPHRAVTLFNLFLLEKSMTDVVSLLRQKVT
KVAGKIEESYEKQAYRFSKYNPFIPPNLKVNVLTYEELIAYAIEQHGQEKINEIQFSIIKNREDKDDRAVTIDLVDKLAI
LCKEKAPMIVLFFAPPYYPAVSSRNNQLIKEVVGEMEKYANFNHNISFENQNYFGGISDLSYVGLQNPLHSMSSLVDNMP
LWDKGYSIPLQELEEFDVPVLNMGPVGKDAHQWTERLDVNYAFETLLDMLPICIEKLLVSNKITQV

Sequences:

>Translated_546_residues
MSKWQSKEQLIQLLSGLVEIPSITGTEAEVILPDFIVEQLSDLQYFKENPHHLQKNPTGDGRYFVTALVKKSDRTKNTVI
LVSHFDVVDVQDYGVWKEDAFNPKKLTSMFYSHKDELPDHVREDIEQGDWLFGRGTMDMKCGLALQMAMIEQACEGRFDG
NVLLLAVPDEEVNSVGMRAAVPRLLELAREHDLDYKTVLNSEPMFSRHPGDQKKYIYTGSIGKVLPGFLCYGKETHVGEP
FAGLNGSYMASLITAELELNTDLCDIVEGEASPPPTNLLQRDLKEDYSVQIPHRAVTLFNLFLLEKSMTDVVSLLRQKVT
KVAGKIEESYEKQAYRFSKYNPFIPPNLKVNVLTYEELIAYAIEQHGQEKINEIQFSIIKNREDKDDRAVTIDLVDKLAI
LCKEKAPMIVLFFAPPYYPAVSSRNNQLIKEVVGEMEKYANFNHNISFENQNYFGGISDLSYVGLQNPLHSMSSLVDNMP
LWDKGYSIPLQELEEFDVPVLNMGPVGKDAHQWTERLDVNYAFETLLDMLPICIEKLLVSNKITQV
>Mature_545_residues
SKWQSKEQLIQLLSGLVEIPSITGTEAEVILPDFIVEQLSDLQYFKENPHHLQKNPTGDGRYFVTALVKKSDRTKNTVIL
VSHFDVVDVQDYGVWKEDAFNPKKLTSMFYSHKDELPDHVREDIEQGDWLFGRGTMDMKCGLALQMAMIEQACEGRFDGN
VLLLAVPDEEVNSVGMRAAVPRLLELAREHDLDYKTVLNSEPMFSRHPGDQKKYIYTGSIGKVLPGFLCYGKETHVGEPF
AGLNGSYMASLITAELELNTDLCDIVEGEASPPPTNLLQRDLKEDYSVQIPHRAVTLFNLFLLEKSMTDVVSLLRQKVTK
VAGKIEESYEKQAYRFSKYNPFIPPNLKVNVLTYEELIAYAIEQHGQEKINEIQFSIIKNREDKDDRAVTIDLVDKLAIL
CKEKAPMIVLFFAPPYYPAVSSRNNQLIKEVVGEMEKYANFNHNISFENQNYFGGISDLSYVGLQNPLHSMSSLVDNMPL
WDKGYSIPLQELEEFDVPVLNMGPVGKDAHQWTERLDVNYAFETLLDMLPICIEKLLVSNKITQV

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 62063; Mature: 61932

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKWQSKEQLIQLLSGLVEIPSITGTEAEVILPDFIVEQLSDLQYFKENPHHLQKNPTGD
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRYFVTALVKKSDRTKNTVILVSHFDVVDVQDYGVWKEDAFNPKKLTSMFYSHKDELPDH
CCEEEHHHHHHCCCCCCEEEEEEECCEEECHHCCCCHHCCCCHHHHHHHHHHHHHCCHHH
VREDIEQGDWLFGRGTMDMKCGLALQMAMIEQACEGRFDGNVLLLAVPDEEVNSVGMRAA
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH
VPRLLELAREHDLDYKTVLNSEPMFSRHPGDQKKYIYTGSIGKVLPGFLCYGKETHVGEP
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
FAGLNGSYMASLITAELELNTDLCDIVEGEASPPPTNLLQRDLKEDYSVQIPHRAVTLFN
CCCCCHHHHHHHHHHHEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHH
LFLLEKSMTDVVSLLRQKVTKVAGKIEESYEKQAYRFSKYNPFIPPNLKVNVLTYEELIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH
YAIEQHGQEKINEIQFSIIKNREDKDDRAVTIDLVDKLAILCKEKAPMIVLFFAPPYYPA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCC
VSSRNNQLIKEVVGEMEKYANFNHNISFENQNYFGGISDLSYVGLQNPLHSMSSLVDNMP
CCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC
LWDKGYSIPLQELEEFDVPVLNMGPVGKDAHQWTERLDVNYAFETLLDMLPICIEKLLVS
CCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NKITQV
HHHCCC
>Mature Secondary Structure 
SKWQSKEQLIQLLSGLVEIPSITGTEAEVILPDFIVEQLSDLQYFKENPHHLQKNPTGD
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRYFVTALVKKSDRTKNTVILVSHFDVVDVQDYGVWKEDAFNPKKLTSMFYSHKDELPDH
CCEEEHHHHHHCCCCCCEEEEEEECCEEECHHCCCCHHCCCCHHHHHHHHHHHHHCCHHH
VREDIEQGDWLFGRGTMDMKCGLALQMAMIEQACEGRFDGNVLLLAVPDEEVNSVGMRAA
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH
VPRLLELAREHDLDYKTVLNSEPMFSRHPGDQKKYIYTGSIGKVLPGFLCYGKETHVGEP
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
FAGLNGSYMASLITAELELNTDLCDIVEGEASPPPTNLLQRDLKEDYSVQIPHRAVTLFN
CCCCCHHHHHHHHHHHEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHH
LFLLEKSMTDVVSLLRQKVTKVAGKIEESYEKQAYRFSKYNPFIPPNLKVNVLTYEELIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH
YAIEQHGQEKINEIQFSIIKNREDKDDRAVTIDLVDKLAILCKEKAPMIVLFFAPPYYPA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCC
VSSRNNQLIKEVVGEMEKYANFNHNISFENQNYFGGISDLSYVGLQNPLHSMSSLVDNMP
CCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC
LWDKGYSIPLQELEEFDVPVLNMGPVGKDAHQWTERLDVNYAFETLLDMLPICIEKLLVS
CCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NKITQV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]