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The map label for this gene is yxdM [H]

Identifier: 52142402

GI number: 52142402

Start: 2956981

End: 2957640

Strand: Reverse

Name: yxdM [H]

Synonym: BCZK2841

Alternate gene names: 52142402

Gene position: 2957640-2956981 (Counterclockwise)

Preceding gene: 52142400

Following gene: 52142401

Centisome position: 55.79

GC content: 30.61

Gene sequence:

>660_bases
TTGTACTTCCGAAAGAATGATAGTAAAAGTGCCGAGTATATCCTACTCGGTGTTTTAACTATGCTTGGAATTTCTAACAA
GCAATTAAGGCGGCTTGTATTTATTGAAAATATGTTTATTGGAGTATTATCAATTTTTATGGGCACTCAAGCCGGATTGG
TCTTTTTTTATCTTTTTTTATTAATTACCTCAAAGTTAACAGGTGCACAAAATCTTTATTTATATTTACCAATAAAAGCA
GTCATATTAACAATTATAATATTTATCATTTTATTTTTGATAGTATCTATGTTGACTCCTATACTTATTCGCACCCGTAA
GACAAAACGTCTTATGGAAGAGAAGCATCTAAATAAACAAGGGAGAAAACCTTCTTTTCTTCTGCCTTTCTTAGGCTTAG
TGTGTCTAGGAATAGGTTATTATATCGCTGGGGACACGGATTGGTACATGAAGAAAAATGGTTTTGCAAATATGTATAGG
GATTTTATTATCATTTCGATTATTCCTCTTGTATCAATGGGAACTTACTTATTATTTTCACAAGTTACTTTTGTGTGTAT
TAGTTTACTAAAAAAGAGTCGTAAATTTTATATGAAACAAAGTAATATGTTGTGGATTTCTGACTTAGCGACACCAAGTA
TTTTTAATAAGCATGCGTAA

Upstream 100 bases:

>100_bases
ATTTTAATGGATCCGTATTTCCGTATTTGGTTACCAATTGTAATTTTTGTAGTTATTTATACGATTTACTACTTTATTAC
TGTCCAATTATATAAAGGAA

Downstream 100 bases:

>100_bases
CAATATGAAATCAATAGAATATTGAATAAATTGGTAGGGAATCACTTATCAATAAATTAAATTTATAATGATAAAAAAGT
AGCAGAACTTCACTACTTTT

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MYFRKNDSKSAEYILLGVLTMLGISNKQLRRLVFIENMFIGVLSIFMGTQAGLVFFYLFLLITSKLTGAQNLYLYLPIKA
VILTIIIFIILFLIVSMLTPILIRTRKTKRLMEEKHLNKQGRKPSFLLPFLGLVCLGIGYYIAGDTDWYMKKNGFANMYR
DFIIISIIPLVSMGTYLLFSQVTFVCISLLKKSRKFYMKQSNMLWISDLATPSIFNKHA

Sequences:

>Translated_219_residues
MYFRKNDSKSAEYILLGVLTMLGISNKQLRRLVFIENMFIGVLSIFMGTQAGLVFFYLFLLITSKLTGAQNLYLYLPIKA
VILTIIIFIILFLIVSMLTPILIRTRKTKRLMEEKHLNKQGRKPSFLLPFLGLVCLGIGYYIAGDTDWYMKKNGFANMYR
DFIIISIIPLVSMGTYLLFSQVTFVCISLLKKSRKFYMKQSNMLWISDLATPSIFNKHA
>Mature_219_residues
MYFRKNDSKSAEYILLGVLTMLGISNKQLRRLVFIENMFIGVLSIFMGTQAGLVFFYLFLLITSKLTGAQNLYLYLPIKA
VILTIIIFIILFLIVSMLTPILIRTRKTKRLMEEKHLNKQGRKPSFLLPFLGLVCLGIGYYIAGDTDWYMKKNGFANMYR
DFIIISIIPLVSMGTYLLFSQVTFVCISLLKKSRKFYMKQSNMLWISDLATPSIFNKHA

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 25277; Mature: 25277

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFRKNDSKSAEYILLGVLTMLGISNKQLRRLVFIENMFIGVLSIFMGTQAGLVFFYLFL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LITSKLTGAQNLYLYLPIKAVILTIIIFIILFLIVSMLTPILIRTRKTKRLMEEKHLNKQ
HHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRKPSFLLPFLGLVCLGIGYYIAGDTDWYMKKNGFANMYRDFIIISIIPLVSMGTYLLFS
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QVTFVCISLLKKSRKFYMKQSNMLWISDLATPSIFNKHA
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCC
>Mature Secondary Structure
MYFRKNDSKSAEYILLGVLTMLGISNKQLRRLVFIENMFIGVLSIFMGTQAGLVFFYLFL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LITSKLTGAQNLYLYLPIKAVILTIIIFIILFLIVSMLTPILIRTRKTKRLMEEKHLNKQ
HHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRKPSFLLPFLGLVCLGIGYYIAGDTDWYMKKNGFANMYRDFIIISIIPLVSMGTYLLFS
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QVTFVCISLLKKSRKFYMKQSNMLWISDLATPSIFNKHA
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]