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The map label for this gene is ybcD

Identifier: 52142369

GI number: 52142369

Start: 3000629

End: 3003253

Strand: Reverse

Name: ybcD

Synonym: BCZK2873

Alternate gene names: NA

Gene position: 3003253-3000629 (Counterclockwise)

Preceding gene: 52142368

Following gene: 52142370

Centisome position: 56.66

GC content: 38.7

Gene sequence:

>2625_bases
ATGAGCATACAGTCAATCGTAACGAAAGAAACTTTAAAAAAGAAAGATACAAACATTGAAATACAAGAAAAGAATATGAA
TGATTTAGTTGTATCTGCTAGCCGAGTGATTGCGCCACTTTGGCCTATCTCTACATTTGCAGCTCATCACCCTTGGATGG
GGCTTGAAAAGCAATCATTTGAACAAGTCGCAAATTGGTTAAAAGAAGCTCGTAATGTAGATATATATCCTAGTGCTTCC
ATGATTCATTCGGCAAAGGCGAAAGGTGAGATTGAGGAATCATTTTTACAAATTGCCTTGTCGCGTTGGCTTGATTCACA
ATCTTTTCATATGCCGCGAGAGACAGCGGAGCGTTTTTGTCAAGAAGCTTTAAAGTTAGAAAGATTACCTTCTAGTCTAT
TATCATCGCCAGAATTAAATAAATTGGCAGAAGAAATAAGTTATGTAAATACAGGGAGTATGAAAGACTCTTCTATGCAA
CCAATAAGCTCGCTTATAGAGAATCAAAAGGGTGACAACTTATCTGATATTCTTAATTATCATATTATTAAATGGTGTAA
GTTATATCTTGATGACACCGGGGCAAGTTGGACGATGCCAAACCGAGAGAAAGGTTTTTATCGTGCATGGCAACACCTTA
TTACATTTGATCCAGCGCTCAGTAAAAATGAGCGTAAAGTTTTAAAAGATTGGCCAGAAGATCCCCTTATAGCTTTAACA
AAAGCATTATCTGAATTAGGAATTTCTGAATCTAACATGCAAGCTTACCTTGAAGGACACTTACTTTCTTTGCCTGGATG
GGCAGGAATGATACGATGGCGCTCGCAACAATCAATTGAGGAACAGGAACTTCTCGTAGAATATTTAGCAGTTCGACTTT
CTATGGAGCTAGCCATTGTAAAACCGTATTTACCTTTAAAGAATCAAAAGGCTGAGAAAAAAGTTTCGATTGTTCCACTG
ATAGCTTCTTGGATTTATTGGGGGGATATTTCAGTAGAGAAATGGTCACAAATGTCTGCAACTGAACAAAGTGAATTATT
AGCATTTGCTTATCGCTTTGATGAAAATACTCGCAAGAAACTTTGGCTGAAAGCTTGGGAACAGACCCATGCAGAGCAAT
TAAGGGAGAAGATTGCTTCTAAGCAACGTGCAACTAATGATAAAAAGCGTGTAGTAGCTCAATTAGCATTTTGTATTGAT
GTACGTTCAGAACCGTTTCGTCGCCACCTTGAAAAATTAGGTCCGTTCGAAACGTTTGGAATAGCTGGTTTCTTTGGGTT
ACCAATTGCGACTACTGAACTAGGCAGTAATAATAGCCATCCTTCTTTGCCAGTTATATTAAAACCGAAACATCAAATAA
AAGAGCTCACGGATGAAAATGAATATAACTCTTATGAGCAACGTAAGAAGATAGACAGCTCAGTAAGTTATACGTTTAAG
ACAATGAAACAAAATGTACTGACAAGTATGCTATTACCTGAAGTAAGTGGCCCTTTACTTGGTTTACAAATGGTGACAAG
GAGTTTTGTGCCAAGAAGTGTAGGTGGCTTCATTCGTAACCTTCGTAAAACGATGTTACAAAAACCTAATACAACATTCT
CACTTAATCATGTTCATGATACAAACTGTGAGATACCGATCGGTTTTACGAAAGAAGAAAAAGTGAACTATGTGCGTCAA
GCTTTAAAAATGGTGGGATTAACAGAAGGTTTCGCTCCTTTAGTTGTAATGTGCGGCCACAGTAGTCAAAGTACGAACAA
TCCTTATGCTGCAGCGCTTGAGTGTGGTGCGTGTGGCGGAGCAGCAGGGGGATTCAATGCAAGAGTTTTCGCTACTTTAT
GTAATCTTCCAGAAGTAAGAGAGGCGTTGTCTGCTGAAGGTATTAACATTCCTGAGGATACCATTTTTGCAGCAGCTGAA
CATAAAACAACAGTGGATGAATTGGAATGGATTTACGTCCCAAAACTTTCGGAAACTGCGCAAGAAGCATTTGATTGTAT
TGATTCGATTATGCCGAATGTAAGTCAACATGCAAATAGAGAGCGTTTAATGCAATTACCTAATTTTAAAACGAAAATAA
AAAATCCGAGTAAAGAGGCACACCGATTTGCAGAAGATTGGAGTGAAATACGTCCGGAATGGGGATTAGCCCGTAATGCA
TCTTTTATTATCGGACAGCGTGAATTGACTCGGGATTGTGACTTAGAAGGTAGAGCTTTCCTTCATAATTATGATTGGAA
ACAGGATGAAAGTGGCGATATATTAGCTAGCATCATAGCGGGACCAGGAACAGTAGCGCAGTGGATCAATCTACAATATT
ACGCTTCAACTGTAGCTCCTCATTATTATGGTAGTGGAAATAAAACAACACAAACCGTTACGGCAGGTCTCGGTGTTATG
CAAGGAAATGCAAGTGATTTGTTATCAGGCTTACCTTGGCAATCCGTTATGCAGTCAGATAGTGAAACGTATCACTCACC
ACTTCGTTTACTCATTGTAATTCAAGCGCCTACTAAATATATAGAACGTTTGCTAAATAATGATTTCACATTTCGAGAAA
AAGTTCAAAATGGATGGGTCAGACTTGCAAGTGTTGATCCAGAGGGACGCTGGAAAAACTGGTAG

Upstream 100 bases:

>100_bases
TGTATCTTTGGTTCGTTCGAGTAGGTGAAGCAAGACAAAAGTCAGTAGAAAGTCATCCAAGCTATCTGAAACATGATGTA
TCAAAGGGAGGTAATCAGTG

Downstream 100 bases:

>100_bases
CAATCATGTAATGCATATCAACTATTGTTACTAGCTTAAAAGTTTCATAAATACAATCATGAAGAAGGAGTGCTATATAT
GAGTTCAAAGCATAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 874; Mature: 873

Protein sequence:

>874_residues
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYVNTGSMKDSSMQ
PISSLIENQKGDNLSDILNYHIIKWCKLYLDDTGASWTMPNREKGFYRAWQHLITFDPALSKNERKVLKDWPEDPLIALT
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLVEYLAVRLSMELAIVKPYLPLKNQKAEKKVSIVPL
IASWIYWGDISVEKWSQMSATEQSELLAFAYRFDENTRKKLWLKAWEQTHAEQLREKIASKQRATNDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELTDENEYNSYEQRKKIDSSVSYTFK
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRSVGGFIRNLRKTMLQKPNTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQ
ALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGINIPEDTIFAAAE
HKTTVDELEWIYVPKLSETAQEAFDCIDSIMPNVSQHANRERLMQLPNFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDPEGRWKNW

Sequences:

>Translated_874_residues
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYVNTGSMKDSSMQ
PISSLIENQKGDNLSDILNYHIIKWCKLYLDDTGASWTMPNREKGFYRAWQHLITFDPALSKNERKVLKDWPEDPLIALT
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLVEYLAVRLSMELAIVKPYLPLKNQKAEKKVSIVPL
IASWIYWGDISVEKWSQMSATEQSELLAFAYRFDENTRKKLWLKAWEQTHAEQLREKIASKQRATNDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELTDENEYNSYEQRKKIDSSVSYTFK
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRSVGGFIRNLRKTMLQKPNTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQ
ALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGINIPEDTIFAAAE
HKTTVDELEWIYVPKLSETAQEAFDCIDSIMPNVSQHANRERLMQLPNFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDPEGRWKNW
>Mature_873_residues
SIQSIVTKETLKKKDTNIEIQEKNMNDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSASM
IHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYVNTGSMKDSSMQP
ISSLIENQKGDNLSDILNYHIIKWCKLYLDDTGASWTMPNREKGFYRAWQHLITFDPALSKNERKVLKDWPEDPLIALTK
ALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLVEYLAVRLSMELAIVKPYLPLKNQKAEKKVSIVPLI
ASWIYWGDISVEKWSQMSATEQSELLAFAYRFDENTRKKLWLKAWEQTHAEQLREKIASKQRATNDKKRVVAQLAFCIDV
RSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELTDENEYNSYEQRKKIDSSVSYTFKT
MKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRSVGGFIRNLRKTMLQKPNTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQA
LKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGINIPEDTIFAAAEH
KTTVDELEWIYVPKLSETAQEAFDCIDSIMPNVSQHANRERLMQLPNFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNAS
FIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVMQ
GNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDPEGRWKNW

Specific function: Unknown

COG id: COG3002

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0753 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018752 [H]

Pfam domain/function: PF10070 DUF2309 [H]

EC number: NA

Molecular weight: Translated: 99075; Mature: 98944

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSF
CCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEISYVNTGSMKDSSMQPISSLIENQKGDNLSDILNY
HHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
HIIKWCKLYLDDTGASWTMPNREKGFYRAWQHLITFDPALSKNERKVLKDWPEDPLIALT
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLVEYLAVRLSMELAIV
HHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEE
KPYLPLKNQKAEKKVSIVPLIASWIYWGDISVEKWSQMSATEQSELLAFAYRFDENTRKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
LWLKAWEQTHAEQLREKIASKQRATNDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELTDENEYNSYEQRKKIDSSVSYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRSVGGFIRNLRKTMLQKPNTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCEEC
TNCEIPIGFTKEEKVNYVRQALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGINIPEDTIFAAAEHKTTVDELEWIYVPKLSETA
CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHEEHHCCCCCHHHCCEEECCCHHHHH
QEAFDCIDSIMPNVSQHANRERLMQLPNFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILASIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHHHCCCCHHHHHCCCHHHHHCCEEEEEEEECCHHH
IERLLNNDFTFREKVQNGWVRLASVDPEGRWKNW
HHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SIQSIVTKETLKKKDTNIEIQEKNMNDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSF
CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEISYVNTGSMKDSSMQPISSLIENQKGDNLSDILNY
HHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
HIIKWCKLYLDDTGASWTMPNREKGFYRAWQHLITFDPALSKNERKVLKDWPEDPLIALT
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLVEYLAVRLSMELAIV
HHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEE
KPYLPLKNQKAEKKVSIVPLIASWIYWGDISVEKWSQMSATEQSELLAFAYRFDENTRKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
LWLKAWEQTHAEQLREKIASKQRATNDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELTDENEYNSYEQRKKIDSSVSYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRSVGGFIRNLRKTMLQKPNTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCEEC
TNCEIPIGFTKEEKVNYVRQALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGINIPEDTIFAAAEHKTTVDELEWIYVPKLSETA
CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHEEHHCCCCCHHHCCEEECCCHHHHH
QEAFDCIDSIMPNVSQHANRERLMQLPNFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILASIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHHHCCCCHHHHHCCCHHHHHCCEEEEEEEECCHHH
IERLLNNDFTFREKVQNGWVRLASVDPEGRWKNW
HHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA