Click here to switch to the map view.

The map label for this gene is ybcI [H]

Identifier: 52142366

GI number: 52142366

Start: 3005441

End: 3005803

Strand: Reverse

Name: ybcI [H]

Synonym: BCZK2875

Alternate gene names: 52142366

Gene position: 3005803-3005441 (Counterclockwise)

Preceding gene: 52142362

Following gene: 52142368

Centisome position: 56.7

GC content: 34.71

Gene sequence:

>363_bases
ATGAAAAACTCAAAAGGCTCTATTGAGTCGGAGATAAGTAAAGCAATTACGCACTGGGAAAAGGACTACCTAGGACGCGG
GTCTATATCCGTTAAGACAGATATATTACGAGATATGATTATCGTAAATTTACAAGGTATTTTAACGCCGGCTGAATATA
CTGTTTGTGAAACGAAAGACGGTATGCTAACGATAAAGAAAAATCGTTCGGAGTTAGTTGAATCTGGAATTGACGATTTG
AAAGAGATTATATTAGAATTAACTGGAGAAAAAGTGAAAAGTTTTCATACGGATATAAGCTCGCGTACTGGTGAACGAGT
AATGATTTTTAAATTGTTCCATAATCTTGAGGAGAAATTTTAA

Upstream 100 bases:

>100_bases
GCAACAATCCCTATAAATTCTTCTCAATAATTGAAAATAAAATCAATCCAGATTATTATATTGTTATTGTAAATTTATTT
TATTGAAGGAGGATACATAA

Downstream 100 bases:

>100_bases
AAATTAAAATCACTGTAGGGGTAGTGGAAGATACACTAAAAATGCAGTGAGGTAATTAAGAAATCTACAAGTTGTGTACT
TTATTTTGTCTTATTAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEKVKSFHTDISSRTGERVMIFKLFHNLEEKF

Sequences:

>Translated_120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEKVKSFHTDISSRTGERVMIFKLFHNLEEKF
>Mature_120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEKVKSFHTDISSRTGERVMIFKLFHNLEEKF

Specific function: Unknown

COG id: COG5609

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018745 [H]

Pfam domain/function: PF10057 DUF2294 [H]

EC number: NA

Molecular weight: Translated: 13662; Mature: 13662

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
GMLTIKKNRSELVESGIDDLKEIILELTGEKVKSFHTDISSRTGERVMIFKLFHNLEEKF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
GMLTIKKNRSELVESGIDDLKEIILELTGEKVKSFHTDISSRTGERVMIFKLFHNLEEKF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]