Definition Bacillus cereus E33L, complete genome.
Accession NC_006274
Length 5,300,915

Click here to switch to the map view.

The map label for this gene is ygfF [C]

Identifier: 52142337

GI number: 52142337

Start: 3034604

End: 3035377

Strand: Reverse

Name: ygfF [C]

Synonym: BCZK2906

Alternate gene names: 52142337

Gene position: 3035377-3034604 (Counterclockwise)

Preceding gene: 52142335

Following gene: 52142336

Centisome position: 57.26

GC content: 37.98

Gene sequence:

>774_bases
ATGGAAAAAATGAAGAAACTTGATGGAAAAGTAGCGTTAGTAACAGGGGCGAGTCGAGGAATTGGTCGTGCGATTGCGAT
GAGATTGGCAAACGACGGTGCATTAGTTGCGATTCACTACGGCCGAAATAAGGCAGCTGCAGATGAAACAATTCGTGAGA
TTGAATCTAATGGAGGAAAGACATTCTTAATTGAAGCTGATCTTAATTCAATCGATGGTGTTAAAAAGCTAGTAGAACAA
TTAAAGAATGAATTACAAATAAGAGTTGGTACATCAGAGATTGATATTTTAGTAAACAATGCAGGGATAGGTACACAAGG
GACGATTGAAAATACGACAGAAGAAATTTTTGATGAAATTATGTCCGTAAATATTAAGGCGCCGTTCTTCTTAATTCAGC
AAACATTACCGTTACTACGAGCAGAGGGGCGCGTTATTAACATTTCATCAGCTGAAGTAAGACTTGGTTTTACAGGATCC
ATTGCATACGGTTTAAGTAAAGGTGCACTAAATACGATGACATTGCCTTTAGCTAAACATCTTGGAGAAAGAGGTATAAC
AGTGAATACAATTATGCCTGGATATACGAAGACAGATATCAATGCAAAATTGCTAGATAATCCGGAAATACGAAATTTTG
CTATGAATTCATCTGTGTTCGGACGAATAGGGCAAGTTGAAGATATTGCAGATGCAGTAGCATTTCTTGCTTCTTCTGAT
AGCCGCTGGGTAACGGGGCAAATTATAGATGTTTCTGGTGGATTTTGTTTATAG

Upstream 100 bases:

>100_bases
GCTGGAGAAAAGTGGTTAGGTGAGAGATTAACTGCCCGTAAAAGCCCGATTGGTGAGGGCTGATTAAAGTTTCACTTTAT
CAAATGGAAATTTAGGAAGG

Downstream 100 bases:

>100_bases
AAGGAAAACAGCTTATGACCATCAAGCGACTGAATTGAGATATCCCAAAAAATAGATTCTTATAAATAACTAGGAAATTT
ATTGTAATCAAAGTTTAGAT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEKMKKLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGKTFLIEADLNSIDGVKKLVEQ
LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMSVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS
IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDNPEIRNFAMNSSVFGRIGQVEDIADAVAFLASSD
SRWVTGQIIDVSGGFCL

Sequences:

>Translated_257_residues
MEKMKKLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGKTFLIEADLNSIDGVKKLVEQ
LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMSVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS
IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDNPEIRNFAMNSSVFGRIGQVEDIADAVAFLASSD
SRWVTGQIIDVSGGFCL
>Mature_257_residues
MEKMKKLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGKTFLIEADLNSIDGVKKLVEQ
LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMSVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS
IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDNPEIRNFAMNSSVFGRIGQVEDIADAVAFLASSD
SRWVTGQIIDVSGGFCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=33.0769230769231, Blast_Score=127, Evalue=8e-30,
Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=34.8, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=33.0739299610895, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=34.5177664974619, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI209862901, Length=222, Percent_Identity=30.6306306306306, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI19923983, Length=222, Percent_Identity=30.6306306306306, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=29.0196078431373, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI40254992, Length=254, Percent_Identity=29.5275590551181, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI66933014, Length=265, Percent_Identity=30.5660377358491, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI126723750, Length=265, Percent_Identity=30.5660377358491, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI20149619, Length=203, Percent_Identity=30.5418719211823, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI59889578, Length=210, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=31.3131313131313, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=26.171875, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI126723191, Length=194, Percent_Identity=31.4432989690722, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI40807363, Length=204, Percent_Identity=26.9607843137255, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4758504, Length=264, Percent_Identity=27.6515151515151, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI40254986, Length=213, Percent_Identity=30.5164319248826, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI223718074, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI210032110, Length=216, Percent_Identity=25.462962962963, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4503817, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=35.0597609561753, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=35.5731225296443, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1789208, Length=256, Percent_Identity=33.59375, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=33.8582677165354, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=34.2629482071713, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=29.0196078431373, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=31.3492063492063, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=28.125, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082100, Length=266, Percent_Identity=30.8270676691729, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=30.9160305343511, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787526, Length=260, Percent_Identity=29.6153846153846, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=35.7976653696498, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=32.4110671936759, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=30.8300395256917, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=34.3173431734317, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=31.5384615384615, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=32.2344322344322, Blast_Score=106, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=30.859375, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=34.6715328467153, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=30.9236947791165, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=29.5275590551181, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=34.7826086956522, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17551412, Length=271, Percent_Identity=32.8413284132841, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=32.4817518248175, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17555612, Length=261, Percent_Identity=32.5670498084291, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=277, Percent_Identity=32.4909747292419, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=27.7777777777778, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=29.1970802919708, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=30.2583025830258, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=272, Percent_Identity=31.25, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=270, Percent_Identity=30.3703703703704, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=33.1658291457286, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=199, Percent_Identity=31.6582914572864, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=274, Percent_Identity=30.6569343065693, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=29.2418772563177, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI86565303, Length=224, Percent_Identity=30.3571428571429, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71997099, Length=239, Percent_Identity=30.9623430962343, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=276, Percent_Identity=29.3478260869565, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=30.3482587064677, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=28.8888888888889, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=271, Percent_Identity=30.6273062730627, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72001658, Length=209, Percent_Identity=30.1435406698565, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=281, Percent_Identity=29.1814946619217, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=267, Percent_Identity=28.8389513108614, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=201, Percent_Identity=27.8606965174129, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=198, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=228, Percent_Identity=32.4561403508772, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=31.25, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=261, Percent_Identity=27.9693486590038, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71997402, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=204, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558628, Length=196, Percent_Identity=29.5918367346939, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=206, Percent_Identity=32.5242718446602, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=257, Percent_Identity=26.0700389105058, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6322226, Length=205, Percent_Identity=30.2439024390244, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=37.7952755905512, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=36.1867704280156, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=36.2204724409449, Blast_Score=134, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28571526, Length=263, Percent_Identity=36.1216730038023, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=34.9206349206349, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=33.8582677165354, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24644337, Length=167, Percent_Identity=35.3293413173653, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21357673, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161076371, Length=208, Percent_Identity=33.6538461538462, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI18859837, Length=199, Percent_Identity=31.6582914572864, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45554248, Length=220, Percent_Identity=32.2727272727273, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640117, Length=220, Percent_Identity=32.2727272727273, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=25.7425742574257, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281364892, Length=219, Percent_Identity=28.310502283105, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI19921754, Length=219, Percent_Identity=30.5936073059361, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573296, Length=231, Percent_Identity=30.3030303030303, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647946, Length=273, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI22024069, Length=210, Percent_Identity=29.5238095238095, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45553409, Length=272, Percent_Identity=27.2058823529412, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24647948, Length=272, Percent_Identity=27.2058823529412, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24649181, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27610; Mature: 27610

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MEKMKKLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGK
CCCHHHHCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCE
TFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI
EEEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
MSVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKH
HHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHECCCCCCCCHHEEHHHHHH
LGERGITVNTIMPGYTKTDINAKLLDNPEIRNFAMNSSVFGRIGQVEDIADAVAFLASSD
CCCCCCEEEEECCCCEECCCCEEECCCCCHHHEEECCHHHHCCCCHHHHHHHHHHHHCCC
SRWVTGQIIDVSGGFCL
CCEEEEEEEEECCCCCC
>Mature Secondary Structure
MEKMKKLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGK
CCCHHHHCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCE
TFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI
EEEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
MSVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKH
HHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHECCCCCCCCHHEEHHHHHH
LGERGITVNTIMPGYTKTDINAKLLDNPEIRNFAMNSSVFGRIGQVEDIADAVAFLASSD
CCCCCCEEEEECCCCEECCCCEEECCCCCHHHEEECCHHHHCCCCHHHHHHHHHHHHCCC
SRWVTGQIIDVSGGFCL
CCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]