Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 52142103

GI number: 52142103

Start: 3270859

End: 3271620

Strand: Reverse

Name: yibD [C]

Synonym: BCZK3138

Alternate gene names: 52142103

Gene position: 3271620-3270859 (Counterclockwise)

Preceding gene: 52142104

Following gene: 52142105

Centisome position: 61.72

GC content: 30.84

Gene sequence:

>762_bases
ATGACTGAAATAAACGAATTTTCAGGAAGCGATTCACAAAAAGATGTGAAGTTTTCTATTATAATCCCTGCACATAATGA
AGAAAAATACATTAGAAAATGTTTGGATTCAATTGCAAAAGCATCAGAGGCATATAAAGAACAAACGGAAGTTATAGTTG
TTTTAAATCGTTGCACAGATCAAACAGAGGAAATAGCAAAATCTTATAATTGTATTACATTAAAAAATGAAGATAAAAAC
TTATCTAAAATCCGAAATGCAGGGGCAGAAATAGCTAGTGGAGAAATAATCGTCACTATAGATGCTGATACGATAATGAC
AGAGTCTTTGTTATCTAATGTAGATAAATATTTATCTTCAGGTAAATATATTGGTGGTGGGGTGAATGGGAAGTTCGAAA
GAATGTCTTTTGGAATATTCTTTTCTGCAATTCTAATTATAATTCCCTTACTTTTTAAGTACGGAGCTATATCTGTAGGG
GTTTTTTGGTGTTATAGAAAAGATTTTATGGCAATTAACGGATTTAATGAAAACATGCTTATGGCAGAAGATGCAGATTT
CGCGAAACGGTTAAAAGAATGGGGAAAACGAAATAATAAGAAATTCGGTACCATTAAAAATGGAATGATAACTTCATGCA
GAAGATTTGATACATATGGAGACTGGGCCTTACTTAAAAATCCAAAAGTAATATTAGCGTATCTAAAAGGAAATGATCAA
AAGTATGCAGATAAGACATATTATGATAATCAAGAAAGATAA

Upstream 100 bases:

>100_bases
TGTCTATATTGTTTTAAGTACTCTTTTTTATAATAAAACTTAATCAATTTTAATATATGTTATGTATAACAGATATTTAT
CTAAAATAAGGGGGAATATT

Downstream 100 bases:

>100_bases
CGATGGAGAAAAACGGCAGGAAATAGTGAGAACAGCAGATTTTCTTATACATAATGAGAGCCTAACTTAATTTAATAGAT
ATGATAAGAAAACCATCAAT

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase GT2 Family; Teichoic Acid Biosynthesis Related Protein; Glycosyl Transferase

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTEINEFSGSDSQKDVKFSIIIPAHNEEKYIRKCLDSIAKASEAYKEQTEVIVVLNRCTDQTEEIAKSYNCITLKNEDKN
LSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKFERMSFGIFFSAILIIIPLLFKYGAISVG
VFWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
KYADKTYYDNQER

Sequences:

>Translated_253_residues
MTEINEFSGSDSQKDVKFSIIIPAHNEEKYIRKCLDSIAKASEAYKEQTEVIVVLNRCTDQTEEIAKSYNCITLKNEDKN
LSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKFERMSFGIFFSAILIIIPLLFKYGAISVG
VFWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
KYADKTYYDNQER
>Mature_252_residues
TEINEFSGSDSQKDVKFSIIIPAHNEEKYIRKCLDSIAKASEAYKEQTEVIVVLNRCTDQTEEIAKSYNCITLKNEDKNL
SKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKFERMSFGIFFSAILIIIPLLFKYGAISVGV
FWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQK
YADKTYYDNQER

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28752; Mature: 28621

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEINEFSGSDSQKDVKFSIIIPAHNEEKYIRKCLDSIAKASEAYKEQTEVIVVLNRCTD
CCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
QTEEIAKSYNCITLKNEDKNLSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSS
HHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHC
GKYIGGGVNGKFERMSFGIFFSAILIIIPLLFKYGAISVGVFWCYRKDFMAINGFNENML
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEECCCEEEEECCCCCEE
MAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCC
KYADKTYYDNQER
CCCCCCCCCCCCC
>Mature Secondary Structure 
TEINEFSGSDSQKDVKFSIIIPAHNEEKYIRKCLDSIAKASEAYKEQTEVIVVLNRCTD
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
QTEEIAKSYNCITLKNEDKNLSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSS
HHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHC
GKYIGGGVNGKFERMSFGIFFSAILIIIPLLFKYGAISVGVFWCYRKDFMAINGFNENML
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEECCCEEEEECCCCCEE
MAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCC
KYADKTYYDNQER
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA