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The map label for this gene is ybxG [H]

Identifier: 52142066

GI number: 52142066

Start: 3300288

End: 3301706

Strand: Reverse

Name: ybxG [H]

Synonym: BCZK3176

Alternate gene names: 52142066

Gene position: 3301706-3300288 (Counterclockwise)

Preceding gene: 52142065

Following gene: 52142068

Centisome position: 62.29

GC content: 38.41

Gene sequence:

>1419_bases
ATGAATCATCTAAGAGGGGGAAGTGAAGTGGCAAACAAAGAATTGAAAAGAGGTTTAGAAGCACGTCATATTCAAATGAT
TGCTTTAGGCGGAACGATTGGTGTTGGTTTGTTTATGGGGTCAGCCAGCACAATTAAATGGACAGGTCCGTCAGTTATGC
TTGCGTATGCAATTGCAGGTATTTTTATCTTCTTCATCATGCGTGCCATGGGAGAAATGTTGTATATGGAGCCAAGTACA
GGTTCATTTGCGACATTTGGTCATAAGTATATTCATCCGCTAGCTGGTTATATGACAGCGTGGAGCAACTGGTTCCAGTG
GGTTATCGTTGGGATGTCAGAGATTATCGCAGTTGGAGCGTATATGCAATATTGGTTCCCTGATTTACCAGCTTGGATAC
CAGGTGTAATCGCAATGGTTATTCTTGGCGCAGCTAACTTAATTTCTGTTAAGTCATTTGGTGAATTTGAATTTTGGTTT
GCGATGATTAAAATCGTTACGATTCTATTAATGATTATTGCGGGATTTGGACTTATTTTCTTTGGAATTGGTAACGGTGG
AGAAGCGATTGGCATATCGAATCTTTGGTCAAATGGCGGTTTCTTTACAGGTGGTTTTTCTGGATTCTTCTTTGCATTAT
CACTTGTAGTTGGAGCGTATCAAGGTGTGGAATTAATCGGTATTACTGCTGGTGAAGCGAAGGATCCGAAGAAGACACTT
ACAAGAGCGATTCAAAGTACAATTTGGCGTATTTTAATTTTCTACATCGGTGCGATTTTCGTTATTGTAACTGTGTATCC
GTGGGATCAATTAAGTACAATTGGCAGTCCATTCGTAGCAACTTTTGCGAAAGTTGGTATTACGGCAGCTGCGGGACTTA
TTAACTTCGTTGTTATCACAGCAGCAATGTCTGGTTGTAATAGTGGTATTTATAGTGCTGGTCGTATGCTATATACATTA
GGTGTAAATGGACAAGCACCGAAATATTTCACGAAACTTTCTGGAAATGGTGTACCTTTATTCGGTACAGTTGGCGTAAT
TATCGGTTTAGCGGTCGGTGTAGTTCTAAGTTATATTGCACCAAAAAACTTATTCGTATATGTATATAGTGCGAGTGTAC
TTCCTGGTATGGTACCATGGTTTGTCATTTTAATTAGCCAAATTAATTTTAGAAAAGAAAAGGAAGCAGAGATGAAAGAT
CATCCGTTCAAAATGCCGTTTGCTCCTGTTACAAACTATTTAACAATTGCCTTTTTAATTATGGTATTAATCGGAATGTG
GTTTAACGATGATACGCGCATTTCACTAGTTGTAGGTATTATTTTCTTAGTTATCGTTACAATTAGTTTCTACGCTTTCG
GAATAGGGAAGCGAACTCCATTAGACGTTCAAAATGATCAAGAGATTTCAAGTAAATAA

Upstream 100 bases:

>100_bases
ATTTTAGGATAGCTTTAAAGCTAGTGTAAAATGACGTTTGCTTCATCATTTTCAGGGCCGAAAGGAATTAGGGGAAAGCA
TCTTGTTTTAAAATGCGGCT

Downstream 100 bases:

>100_bases
AGATAATAAAAAGTCCGATTTCTCATTTAGAAATCGGACTTTTTATTATTAAAACTTTTCTAAAACGATTTTCCCAATGG
TGCGCCCACTTTCAAGTAGT

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKEAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLVIVTISFYAFGIGKRTPLDVQNDQEISSK

Sequences:

>Translated_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKEAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLVIVTISFYAFGIGKRTPLDVQNDQEISSK
>Mature_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKEAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLVIVTISFYAFGIGKRTPLDVQNDQEISSK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=450, Percent_Identity=62.4444444444444, Blast_Score=566, Evalue=1e-162,
Organism=Escherichia coli, GI1786789, Length=444, Percent_Identity=43.018018018018, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI1786602, Length=441, Percent_Identity=48.0725623582766, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1790653, Length=432, Percent_Identity=44.212962962963, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786302, Length=438, Percent_Identity=39.9543378995434, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI87081915, Length=470, Percent_Identity=36.3829787234043, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI87081708, Length=463, Percent_Identity=34.5572354211663, Blast_Score=284, Evalue=7e-78,
Organism=Escherichia coli, GI1788480, Length=437, Percent_Identity=36.3844393592677, Blast_Score=279, Evalue=2e-76,
Organism=Escherichia coli, GI1789017, Length=469, Percent_Identity=33.6886993603412, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI87082023, Length=472, Percent_Identity=25.635593220339, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87081869, Length=450, Percent_Identity=22.4444444444444, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324061, Length=504, Percent_Identity=31.1507936507937, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6320772, Length=445, Percent_Identity=33.7078651685393, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6324990, Length=504, Percent_Identity=31.3492063492063, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6324924, Length=422, Percent_Identity=31.2796208530806, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=31.5192743764172, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6322892, Length=440, Percent_Identity=30.2272727272727, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321629, Length=426, Percent_Identity=26.7605633802817, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6324553, Length=405, Percent_Identity=31.8518518518519, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6322967, Length=405, Percent_Identity=28.641975308642, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6321053, Length=495, Percent_Identity=27.8787878787879, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6319608, Length=421, Percent_Identity=28.2660332541568, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6319824, Length=398, Percent_Identity=29.6482412060301, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=411, Percent_Identity=28.4671532846715, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=401, Percent_Identity=26.9326683291771, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320717, Length=400, Percent_Identity=26.75, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6319542, Length=413, Percent_Identity=26.634382566586, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6324981, Length=408, Percent_Identity=28.921568627451, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320364, Length=499, Percent_Identity=23.0460921843687, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51326; Mature: 51326

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHHEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKEAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
MVLIGMWFNDDTRISLVVGIIFLVIVTISFYAFGIGKRTPLDVQNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHHEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKEAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
MVLIGMWFNDDTRISLVVGIIFLVIVTISFYAFGIGKRTPLDVQNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]