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The map label for this gene is rapF [H]

Identifier: 52142020

GI number: 52142020

Start: 3345257

End: 3346351

Strand: Direct

Name: rapF [H]

Synonym: BCZK3223

Alternate gene names: 52142020

Gene position: 3345257-3346351 (Clockwise)

Preceding gene: 52142021

Following gene: 52142019

Centisome position: 63.11

GC content: 30.78

Gene sequence:

>1095_bases
ATGAACGTTCAACTACAAGGTAATGAACAAATTACAAAATTATTTAATGACTGGTATTTAGCCATGCTAAAACAAGATGT
GTCCCAGGCAACAAACTTAAAGCATGAAATTGAGGAAAAAGAACTAAACTTTGAAGAAGATGAAAACTTAGCATTATACT
ATTCTCTACTAGATTTTCGTTTCAAAGTTTTAACTGATGGTTTAAGCATCACAAAAGACAGTTTTAATAAAATAGATTCT
TACGCGATTTCACCTAATCACCAACTTTCTTACTACTATCATTTATTTAAAGCGATTCATGCTACTTTAACAACAAATTA
TAATTTAGCAGGTGAACATTATGAAAAAGCTGAGAGACTACTGGTAAATACCACTGATGATCTAGAAAAAGGGGAATTTA
ATTATCGAATGGCTATTTTCTATTATCATTTTTACCAGCCAATTGAGGCTATTGAATATGCAACCAAGGCGAAAGAATTC
TTCATAAAAGCTGTAGGCTATGAAAAGAATGTCGCCTCTTGTGAAAGTGTATTAGGTGCAGCATTTGTATATTTAAAACA
ATACGAGCAAGCAGAGGAAAAATATAATTCAGCAATCAATATTTTACAGAAGCAGGGTGAAGAATCATTACTGTTAAGAG
TGCGTAATAACTTAGGTTGGCTATATGCTAATCAAAACTTATCAACATTAGCTATTCGTCACCTATCTGAAGTGACAACA
AAAATGCCTACACATTTTAAAGCGATTTTCTTACAAGCAAGGGAACATTCTAAACTTGGTGAGATAAATATCGCTTCAGA
ATTTATTAAAAAAGGATTAAAAATTTGTACAGAACTTAACAATGAAGAATATATGCTTCACTTTAAAATTTTAGAGTCCC
TTAACAATAACGAGTCAACTGAAGACTTAGAAAAAATTATTCTTGAAGGAATTACGTATTTCGACAAAGAATCTTTATAT
AACTACACCCAGGAATATTCAGAAAAGTTAGCTATTAAACTTTACGATGAAAATAATCATATAAAAGCAAGTGAGTATTT
TCATAAGGCGTTACAAGCAAAAGAAAAAACGTTTGAGAAAGGGGCATTAAAATGA

Upstream 100 bases:

>100_bases
AGTTTGTTAAACAAATATTGAGAAATAAAAATCATATTTCTAAATATTGTTATTTTTGATACTATATTTTATAAGAATAT
TCAAAAAGCGAGGGGATTTC

Downstream 100 bases:

>100_bases
TAAAAAAAATTAGTTCTATCGTTTTAGGATTCTCTGTACTAGGTATTGTATCTATTGGCCTAAATAGTTCATTTACATAT
CAAGCAGGCCATGCGGATTT

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRFKVLTDGLSITKDSFNKIDS
YAISPNHQLSYYYHLFKAIHATLTTNYNLAGEHYEKAERLLVNTTDDLEKGEFNYRMAIFYYHFYQPIEAIEYATKAKEF
FIKAVGYEKNVASCESVLGAAFVYLKQYEQAEEKYNSAINILQKQGEESLLLRVRNNLGWLYANQNLSTLAIRHLSEVTT
KMPTHFKAIFLQAREHSKLGEINIASEFIKKGLKICTELNNEEYMLHFKILESLNNNESTEDLEKIILEGITYFDKESLY
NYTQEYSEKLAIKLYDENNHIKASEYFHKALQAKEKTFEKGALK

Sequences:

>Translated_364_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRFKVLTDGLSITKDSFNKIDS
YAISPNHQLSYYYHLFKAIHATLTTNYNLAGEHYEKAERLLVNTTDDLEKGEFNYRMAIFYYHFYQPIEAIEYATKAKEF
FIKAVGYEKNVASCESVLGAAFVYLKQYEQAEEKYNSAINILQKQGEESLLLRVRNNLGWLYANQNLSTLAIRHLSEVTT
KMPTHFKAIFLQAREHSKLGEINIASEFIKKGLKICTELNNEEYMLHFKILESLNNNESTEDLEKIILEGITYFDKESLY
NYTQEYSEKLAIKLYDENNHIKASEYFHKALQAKEKTFEKGALK
>Mature_364_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRFKVLTDGLSITKDSFNKIDS
YAISPNHQLSYYYHLFKAIHATLTTNYNLAGEHYEKAERLLVNTTDDLEKGEFNYRMAIFYYHFYQPIEAIEYATKAKEF
FIKAVGYEKNVASCESVLGAAFVYLKQYEQAEEKYNSAINILQKQGEESLLLRVRNNLGWLYANQNLSTLAIRHLSEVTT
KMPTHFKAIFLQAREHSKLGEINIASEFIKKGLKICTELNNEEYMLHFKILESLNNNESTEDLEKIILEGITYFDKESLY
NYTQEYSEKLAIKLYDENNHIKASEYFHKALQAKEKTFEKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 42625; Mature: 42625

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFR
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEHHHHHHH
FKVLTDGLSITKDSFNKIDSYAISPNHQLSYYYHLFKAIHATLTTNYNLAGEHYEKAERL
HHHHHCCCHHCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVNTTDDLEKGEFNYRMAIFYYHFYQPIEAIEYATKAKEFFIKAVGYEKNVASCESVLGA
EECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AFVYLKQYEQAEEKYNSAINILQKQGEESLLLRVRNNLGWLYANQNLSTLAIRHLSEVTT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
KMPTHFKAIFLQAREHSKLGEINIASEFIKKGLKICTELNNEEYMLHFKILESLNNNEST
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCH
EDLEKIILEGITYFDKESLYNYTQEYSEKLAIKLYDENNHIKASEYFHKALQAKEKTFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHC
GALK
CCCC
>Mature Secondary Structure
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFR
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEHHHHHHH
FKVLTDGLSITKDSFNKIDSYAISPNHQLSYYYHLFKAIHATLTTNYNLAGEHYEKAERL
HHHHHCCCHHCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVNTTDDLEKGEFNYRMAIFYYHFYQPIEAIEYATKAKEFFIKAVGYEKNVASCESVLGA
EECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AFVYLKQYEQAEEKYNSAINILQKQGEESLLLRVRNNLGWLYANQNLSTLAIRHLSEVTT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
KMPTHFKAIFLQAREHSKLGEINIASEFIKKGLKICTELNNEEYMLHFKILESLNNNEST
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCH
EDLEKIILEGITYFDKESLYNYTQEYSEKLAIKLYDENNHIKASEYFHKALQAKEKTFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHC
GALK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]