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The map label for this gene is lytR

Identifier: 52141948

GI number: 52141948

Start: 3428953

End: 3429990

Strand: Reverse

Name: lytR

Synonym: BCZK3295

Alternate gene names: NA

Gene position: 3429990-3428953 (Counterclockwise)

Preceding gene: 52141947

Following gene: 52141949

Centisome position: 64.71

GC content: 32.56

Gene sequence:

>1038_bases
ATGGAGAATAACTCTTCTTCAAGAGAAAGGAAATATAAACGAAAATATAAAAAGACAACGATAATAAGTTCACTACTAGC
GATATTACTATTTGGTGGAGTTGGATATGGTGCTTATGTATATATGAAAACTTCTAATCTCGTACAAAAGTCAAATGTTA
ATTTAGCACGTGGTGAAAAATCAAATTTGCGTGAGGAAACTGTTAAACCGATTACGAATAATGTTTCACTTTTAATTATG
GGAATAGATGAAAATCAAGAACGACAAAAAGAGTATAATGGTGCATTTCATACAGATGCGCTACTGTTAGCTACTTTTAA
TAAAGACAATAAAACAGTGAAACTAACGAGCATACCACGTGATACATACACATATGTTCCGGTTGAAAAGAAAAAAGATA
AAATAACGCATGCATATGGAAGTGGTTTCGTTAAAAATGGTAAAGATGGAGGACCGCAAGCTTCAGTGGAAGCGGTAGAA
AAATTATTACAAGTGCCTGTTGATTATTTTGTGAAGTTTAATTTTAATTCATTTACTAAAATTGTTGATGGATTAGATGG
GATTGAAGTGGATGTCCCGGTTGAATTTACGGAGCAAAATAGTAAAGATGAACCTGACGCAATCTATTTGAAAAAAGGAC
TACAAAAATTAAATGGAGAAGAAGCACTTGCTCTAGCAAGAACGCGTCATATTGATAGTGATGCAATGAGAGGGCAGCGG
CAACAACTTGTTATGGAAGCGATTTTAAGTAAATTAAAAAGTGTAGGATCAATTACGAAGCTAGAAAAAATAGTTGAGGC
GGTTGACGGTGATTTTAAAACAAATTTAGCAATGGATGATATTTTATCTTTTTATAAATACGGTTTAAATTGTTCGGTTG
AAAAAATTCAATTAGCAGGTGATGATTTATACTTACCTAATGGCCCAAACGGCCAACGTGTATATTATTATAATCCTAAT
AAAAAAGATTTACAGAGTTTGAGTAATACTCTTAGAACACATCTAGGATTAAGTGAAAAGGAGATTGAGGAAAATTGA

Upstream 100 bases:

>100_bases
ACAAATAAACAAAGGATTGAAAGAGAATGTATTTCAAAAGGATAGCACTAATTATGAAAAAATGAAAAACATTTTATCTG
AATAAAAAGGGGATAATTAT

Downstream 100 bases:

>100_bases
AGCAGGCGAAATGTCTGCTTTTTATTATGTCTAATAGTATGTCGTTTATCATTAAATGTTATATACTATTTTCAAAATTA
ACATAATAGTGTAACATAAA

Product: transcriptional regulator LytR, attenuator for lytABC and lytR expression

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MENNSSSRERKYKRKYKKTTIISSLLAILLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDNKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIYLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN

Sequences:

>Translated_345_residues
MENNSSSRERKYKRKYKKTTIISSLLAILLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDNKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIYLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN
>Mature_345_residues
MENNSSSRERKYKRKYKKTTIISSLLAILLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDNKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIYLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 38791; Mature: 38791

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNSSSRERKYKRKYKKTTIISSLLAILLFGGVGYGAYVYMKTSNLVQKSNVNLARGEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCEECCCH
SNLREETVKPITNNVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDNKTVKLTSIPR
HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVEKLLQVPVDYFVKFNFNSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCHHHH
IVDGLDGIEVDVPVEFTEQNSKDEPDAIYLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEEECEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKEIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MENNSSSRERKYKRKYKKTTIISSLLAILLFGGVGYGAYVYMKTSNLVQKSNVNLARGEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCEECCCH
SNLREETVKPITNNVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDNKTVKLTSIPR
HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVEKLLQVPVDYFVKFNFNSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCHHHH
IVDGLDGIEVDVPVEFTEQNSKDEPDAIYLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEEECEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKEIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]