| Definition | Bacillus cereus E33L, complete genome. |
|---|---|
| Accession | NC_006274 |
| Length | 5,300,915 |
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The map label for this gene is comEC [H]
Identifier: 52141179
GI number: 52141179
Start: 4180617
End: 4182938
Strand: Reverse
Name: comEC [H]
Synonym: BCZK4071
Alternate gene names: 52141179
Gene position: 4182938-4180617 (Counterclockwise)
Preceding gene: 52141178
Following gene: 52141181
Centisome position: 78.91
GC content: 36.13
Gene sequence:
>2322_bases TTGCAAGGACAATGGGGCTACGTTGCAATCTCATTTATAATAGGGATTGCAATCGCCTTCTCCTCTTCAGTTGTATTGCT GACTTGTTGTCTCGTTCTATATGTTTTCTTTTGTTTGTATCGTACTTCGCGTAAAACCTTCCTATATTGTATGATAGTGT GTTTTAGTGGCGCTATGTACACCACGTATGTTCAAGGGCAAAATAAGCCTCTGGGAGAGTCCTACGAAGCTACAAGAGGA GTGATATATAATACACCTCTTATTAACGGGGATCGCCTATCATTTCAAGTTGAAGATCAGAATAAAAATATAGTGCAGTT AAGTTACAAAATAAAATCAGCCTCGGAAAAGAAACAAATGCGACAATTACATGCAGGAGTGTCATGTATATTTGATGGCG AGAGGAAAGAACCACAAATAGCTCGGAATTTTCATGGGTTTAATTATCGTGATTATTTATATAAACAAAATATTCATTTC ATATTGGAAGCTACATATATTTCTGGATGCCGTAAAACATCGTTGTCACTTGTGCAATGGATTCTTCTTTTGAGGCAGCA AGCAATCTTAGGAGTTACAGAAATGTTTCCAGAGCAATCAGGTGCTTTTATGAACGCGTTACTATTTGGTGATAGACAAC AAATGACATTTGAAGTTGAAGAGCAATATCAACAATTCGGTCTTGTGCATTTGTTGGCGATTTCAGGATCGCATATCGTA TTGTTAATGGTGATTGTGTATTTTATTTTGCTAAGAAGTGGTGTGACAAGGGAGATAGCAACAGTATGTCTTATCTTCTT CATTCCTATATATATGATTTTAGCAGGAGCGTCACCGTCTGTTATGAGAGCTTCTATAACAGGAGTTTTAATGTTAATTG CTTTTATGTGTTCTATTCGTTTATCTAGCTTAGATGCTTTAAGTATAACAGCTATATGTATGCTTATATTTGATCCATAT CTCGTGTTTAATATTGGTTTTCAGTTTTCTTTCGTTGGGAGTTTCGCTTTACTTTTATCTGCCCCGCTCTTACTAGAGAG TGGTAATGGAGTAATTAGAAATTCTATTTATATTTCTCTTATTTCACAGCTCGTTAGTACTCCGATTTTGTTATATCACT TCGGTTATTATTCTCCATATAGTATTTTTCTAAATATCCTTTACGTTCCGTTTTTATCTCTCATTGTATTGCCGTGTAGT ATTATTATTTTGATATGTATGCCGATCATCCCGTTTCTTGCAAAAAGCTTTGCGAATGTACTATCAATAGGTTTGAATCT TTCTAATGATTTTTTAAGTTATTGTGAAAGTTTACCATTTACCCGTCTTAATTTCGGGCAAACACCTATACTTCTTGTAG CTCTATATTGCGTGAGTATTATTAGTGTATTGATGGTTTGGGAAAGGCGAATATCGAAGGGAATGATGTTTATATTTGCG GGTATATTTCTTTTTATTAGTACAGGTCATTATGTATATCCGTATTTTCGAGAAAGTGGGAGTGTTACATTTCTTGATGT TGGCCAGGGGGATGCAATATTAATTCGCCTCCCGTATGATCAAGAGATTTACCTTATTGACACTGGTGGAACAATTCGTT TAAACAAGGAAGAATGGCAACGGAAAAAGCATGAATTTTCTGTTGGAAATGATATTTTGATCCCTTATTTACAAAAGGAA GGTATTAAAAAAATTGATAAATTAATTGTAACGCATGGAGATACAGATCATATCGGTGCTGCACAAGAGTTACTATCAAA TATAACCGTAAAAGAAGTTGTATTTGGTCGAAAGGAACAAGAGGCAATATTAGAAAAAGCAGTAAAGAAACAGGCGTTAG AAAAGGAAGTGAAAATAAGTGAAGTGGGGAAAGGAGAGAGTTGGCGCGTAAATGAAGCGGAATTTTTTGTGCTAGCACCA ACAGGAAAAGAAAGAAGTGAAAATAACGCTTCAATTGTACTGTGGGCAAAATTAGGAGGGATAACGTGGCTGTTTACAGG TGATTTAGAAGAAGGAGGAGAGAAGGGTTTAGTAGCTACATATCCAGATTTACGGGCGGATGTTTTAAAGGTTGCTCATC ATGGAAGTAATACGTCATCTATAATGCCTTTTTTGAACGCCGTACAGCCTAATATAGCGATTATTTCTGTCGGTGAACGG AATAGGTATGGGCACCCTCATAAGGAAGTTATAGAGCGTTTTGAGAAGATGGGGATTGAAATATGGCGCACGGATAAGCA AGGTGCTATTTCCTATGTTTTTAAAGAGGAACGCGGAACGTTTCGTAGCAAAATCACATATGATGAAACACGGAATAGAT AA
Upstream 100 bases:
>100_bases AAGAACTATTTGCATCTTTAGAAAAAGAGAACTTATCAATGGAAGAATTACAGCATGTATTCACGAAAGCAAAAATGATG CTATAAGGAGTGAGTATGAG
Downstream 100 bases:
>100_bases AAAAAAGACTGCCAGTAAGCAGCAGCCTTTAAGAACCGATAAATTTAATAACAGTTGCAATGATGAAAAGTGTTGCGAAA AAACCAAATGAGACGATAAA
Product: DNA internalization-related competence protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MQGQWGYVAISFIIGIAIAFSSSVVLLTCCLVLYVFFCLYRTSRKTFLYCMIVCFSGAMYTTYVQGQNKPLGESYEATRG VIYNTPLINGDRLSFQVEDQNKNIVQLSYKIKSASEKKQMRQLHAGVSCIFDGERKEPQIARNFHGFNYRDYLYKQNIHF ILEATYISGCRKTSLSLVQWILLLRQQAILGVTEMFPEQSGAFMNALLFGDRQQMTFEVEEQYQQFGLVHLLAISGSHIV LLMVIVYFILLRSGVTREIATVCLIFFIPIYMILAGASPSVMRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY LVFNIGFQFSFVGSFALLLSAPLLLESGNGVIRNSIYISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCS IIILICMPIIPFLAKSFANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFA GIFLFISTGHYVYPYFRESGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQRKKHEFSVGNDILIPYLQKE GIKKIDKLIVTHGDTDHIGAAQELLSNITVKEVVFGRKEQEAILEKAVKKQALEKEVKISEVGKGESWRVNEAEFFVLAP TGKERSENNASIVLWAKLGGITWLFTGDLEEGGEKGLVATYPDLRADVLKVAHHGSNTSSIMPFLNAVQPNIAIISVGER NRYGHPHKEVIERFEKMGIEIWRTDKQGAISYVFKEERGTFRSKITYDETRNR
Sequences:
>Translated_773_residues MQGQWGYVAISFIIGIAIAFSSSVVLLTCCLVLYVFFCLYRTSRKTFLYCMIVCFSGAMYTTYVQGQNKPLGESYEATRG VIYNTPLINGDRLSFQVEDQNKNIVQLSYKIKSASEKKQMRQLHAGVSCIFDGERKEPQIARNFHGFNYRDYLYKQNIHF ILEATYISGCRKTSLSLVQWILLLRQQAILGVTEMFPEQSGAFMNALLFGDRQQMTFEVEEQYQQFGLVHLLAISGSHIV LLMVIVYFILLRSGVTREIATVCLIFFIPIYMILAGASPSVMRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY LVFNIGFQFSFVGSFALLLSAPLLLESGNGVIRNSIYISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCS IIILICMPIIPFLAKSFANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFA GIFLFISTGHYVYPYFRESGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQRKKHEFSVGNDILIPYLQKE GIKKIDKLIVTHGDTDHIGAAQELLSNITVKEVVFGRKEQEAILEKAVKKQALEKEVKISEVGKGESWRVNEAEFFVLAP TGKERSENNASIVLWAKLGGITWLFTGDLEEGGEKGLVATYPDLRADVLKVAHHGSNTSSIMPFLNAVQPNIAIISVGER NRYGHPHKEVIERFEKMGIEIWRTDKQGAISYVFKEERGTFRSKITYDETRNR >Mature_773_residues MQGQWGYVAISFIIGIAIAFSSSVVLLTCCLVLYVFFCLYRTSRKTFLYCMIVCFSGAMYTTYVQGQNKPLGESYEATRG VIYNTPLINGDRLSFQVEDQNKNIVQLSYKIKSASEKKQMRQLHAGVSCIFDGERKEPQIARNFHGFNYRDYLYKQNIHF ILEATYISGCRKTSLSLVQWILLLRQQAILGVTEMFPEQSGAFMNALLFGDRQQMTFEVEEQYQQFGLVHLLAISGSHIV LLMVIVYFILLRSGVTREIATVCLIFFIPIYMILAGASPSVMRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY LVFNIGFQFSFVGSFALLLSAPLLLESGNGVIRNSIYISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCS IIILICMPIIPFLAKSFANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFA GIFLFISTGHYVYPYFRESGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQRKKHEFSVGNDILIPYLQKE GIKKIDKLIVTHGDTDHIGAAQELLSNITVKEVVFGRKEQEAILEKAVKKQALEKEVKISEVGKGESWRVNEAEFFVLAP TGKERSENNASIVLWAKLGGITWLFTGDLEEGGEKGLVATYPDLRADVLKVAHHGSNTSSIMPFLNAVQPNIAIISVGER NRYGHPHKEVIERFEKMGIEIWRTDKQGAISYVFKEERGTFRSKITYDETRNR
Specific function: The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding [H]
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=603, Percent_Identity=22.3880597014925, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 87361; Mature: 87361
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGQWGYVAISFIIGIAIAFSSSVVLLTCCLVLYVFFCLYRTSRKTFLYCMIVCFSGAMY CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEE TTYVQGQNKPLGESYEATRGVIYNTPLINGDRLSFQVEDQNKNIVQLSYKIKSASEKKQM EEEEECCCCCCCCCHHHHCCEEEECCEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHH RQLHAGVSCIFDGERKEPQIARNFHGFNYRDYLYKQNIHFILEATYISGCRKTSLSLVQW HHHHCCCEEEECCCCCCCHHHHHCCCCCHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHH ILLLRQQAILGVTEMFPEQSGAFMNALLFGDRQQMTFEVEEQYQQFGLVHLLAISGSHIV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHEEEHHHHHHHHHCHHEEEEECCCHHH LLMVIVYFILLRSGVTREIATVCLIFFIPIYMILAGASPSVMRASITGVLMLIAFMCSIR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSSLDALSITAICMLIFDPYLVFNIGFQFSFVGSFALLLSAPLLLESGNGVIRNSIYISL HHCCCHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHCCCEEECCCCEEHHHHHHHH ISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICMPIIPFLAKSFANV HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFA HHHCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFLFISTGHYVYPYFRESGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQ HHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEEECHHHHH RKKHEFSVGNDILIPYLQKEGIKKIDKLIVTHGDTDHIGAAQELLSNITVKEVVFGRKEQ HHHHCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHCCCHH EAILEKAVKKQALEKEVKISEVGKGESWRVNEAEFFVLAPTGKERSENNASIVLWAKLGG HHHHHHHHHHHHHHHHCCHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEEECC ITWLFTGDLEEGGEKGLVATYPDLRADVLKVAHHGSNTSSIMPFLNAVQPNIAIISVGER EEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCC NRYGHPHKEVIERFEKMGIEIWRTDKQGAISYVFKEERGTFRSKITYDETRNR CCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCHHHCEECHHCCCC >Mature Secondary Structure MQGQWGYVAISFIIGIAIAFSSSVVLLTCCLVLYVFFCLYRTSRKTFLYCMIVCFSGAMY CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEE TTYVQGQNKPLGESYEATRGVIYNTPLINGDRLSFQVEDQNKNIVQLSYKIKSASEKKQM EEEEECCCCCCCCCHHHHCCEEEECCEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHH RQLHAGVSCIFDGERKEPQIARNFHGFNYRDYLYKQNIHFILEATYISGCRKTSLSLVQW HHHHCCCEEEECCCCCCCHHHHHCCCCCHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHH ILLLRQQAILGVTEMFPEQSGAFMNALLFGDRQQMTFEVEEQYQQFGLVHLLAISGSHIV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHEEEHHHHHHHHHCHHEEEEECCCHHH LLMVIVYFILLRSGVTREIATVCLIFFIPIYMILAGASPSVMRASITGVLMLIAFMCSIR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSSLDALSITAICMLIFDPYLVFNIGFQFSFVGSFALLLSAPLLLESGNGVIRNSIYISL HHCCCHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHCCCEEECCCCEEHHHHHHHH ISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICMPIIPFLAKSFANV HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFA HHHCCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFLFISTGHYVYPYFRESGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQ HHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEEECHHHHH RKKHEFSVGNDILIPYLQKEGIKKIDKLIVTHGDTDHIGAAQELLSNITVKEVVFGRKEQ HHHHCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHCCCHH EAILEKAVKKQALEKEVKISEVGKGESWRVNEAEFFVLAPTGKERSENNASIVLWAKLGG HHHHHHHHHHHHHHHHCCHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEEECC ITWLFTGDLEEGGEKGLVATYPDLRADVLKVAHHGSNTSSIMPFLNAVQPNIAIISVGER EEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCC NRYGHPHKEVIERFEKMGIEIWRTDKQGAISYVFKEERGTFRSKITYDETRNR CCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCHHHCEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7968523; 8969508; 9384377 [H]