| Definition | Bacillus cereus E33L, complete genome. |
|---|---|
| Accession | NC_006274 |
| Length | 5,300,915 |
Click here to switch to the map view.
The map label for this gene is recJ [H]
Identifier: 52141097
GI number: 52141097
Start: 4259237
End: 4261576
Strand: Reverse
Name: recJ [H]
Synonym: BCZK4153
Alternate gene names: 52141097
Gene position: 4261576-4259237 (Counterclockwise)
Preceding gene: 52141096
Following gene: 52141098
Centisome position: 80.39
GC content: 38.33
Gene sequence:
>2340_bases GTGTTACAACCGAAGACGCGTTGGAAAGAAAAAGAATATAATGGCGAGCGAGTGAGTGAATTAGCAAGTAAATTACAATT ATCACCGCTTGTCGTTTCGTTATTCCTCGGTAGAGGACTAGATACAGAAGATAAGATTTTAGATTTTTTAAATACAGAAA ATCAAGAATTTCATGATCCATTTTTATTAGAAGGAATGGATAGAACGGTAGAACGTGTAAATAAGGCGATTCAAAATGGA GAGCAAATATTAATATTTGGTGACTACGATGCGGACGGAGTAAGTAGTACGACTGTATTATATCTTGCCCTACAAGAATT AGGTGCAGACGTAGAATTTTATATCCCAAACCGTTTTACAGAAGGTTATGGACCAAACGAAGAAGCATTCCGTTGGGCGC ATAGCGCAGGATTCTCACTCATTATTACTGTTGATACTGGTATCGCAGCTGTACATGAAGCGAAAGTAGCGAAGGAACTT GGGATAGATCTTATTATTACGGATCACCATGAGCCGCCACCAGAATTGCCAGAAGCACTTGCGATTATTCATCCGAAATT AGATGGCGGTGTGTATCCGTTTCACTATTTAGCGGGCGTTGGTGTTGCGTTTAAAGTTGCGCATGCACTACTGGGCCGTG TACCAGAACATTTATTAGAAATTGCAGTAATTGGTACAGTAGCCGATTTAGTATCACTTCACGGTGAAAATAGATTGCTA GTGAAGCGCGGTTTAAAACATATGCGCATGACGAAAAATATCGGACTAAAGGCGCTATTTAAAGTAGCTAACGTTTCGCA AAGTGAAATTACAGAAGAGAGTATTGGCTTCTCAATCGCACCTCGTATTAATGCAGTTGGACGTTTAGAAGATGCTACGC CGGCTGTACATCTTTTATTATCAGAGGATCCGGAAGAAGCGAAAGAGCTGGCTGAAGAAATTGATGAACTGAACAAACTG CGAAAAGATATTGTAAAGCAAATTACAGAAGAAGCTATCGCTGAGGTGGAAAATAATTTCCCGCCTGAAGACAATAAAGT ATTAGTGCTTGCAAAAGAAGGCTGGAATCCAGGTGTAATTGGAATTGTAGCTTCTAAATTAGTTGAACGTTTTTATCGTC CAACGATTGTATTATGCATTGATCCTGTAAAAGAAACTGCAAAAGGTTCAGCGCGTAGTATTGCAGGATTCGATTTGTTT GCAAACTTGTCAGATTGTAGAGAGTTATTGCCACACTTCGGGGGACATCCGATGGCAGCGGGAATGACGCTACATATGAA TGATGTAGATGAATTACGCCGCCGTTTAAATGAGCAAGCAGAGGTAATTTTAACGGAAGAAGATTTTATCCCAATTACAG CTGTCGATGCTTTTTGTAAAGTGGAGGACGTAACACTTGCAGCAATCGAGGATATGCAAAAGTTGGCACCATTTGGTGTT GGAAATCCAAAGCCACGTATTGCGGTGAAGGATGCAGAGTTAGAAAGTATTCGTGCAATCGGATCAGACGGTTCTCATTT AAAAATGGCTCTTCGTGATGGACAGGCAACACTTGATACAATCGGGTTTGGATTTGGAGCGTATGCGAAAGAAATTTCTC CAGTTGCAAAAGTATCTGTAATCGGGGAAGCGTCTATTAATGAATGGAATAATTTTAAGAAGCCGCAATTAATGGTGCAA GATATTGCTGTAGAGGCATGGCAATTATTTGATTGGCGCAGTATGCGTAACGTAGAAGCAAATTTAGCAGAACTTCCGAA AGAAAAAATAACGATGGTGTATTTTTCTAAAGAGGTATTGCATAAATTTTCTTTAGAAGACTATAAAGAGCATATGATGC ATGCATCAGAAGTAACCGAGTTAGATGAGCAATACATCGTGTTACTTGATTTACCAACAGGAACAGATGAATTACGAGAT CTATTTAAAGTTGGGTTCCCGTCGCGAATTTATACGCTATTTTATCAAGAGAATAATCATTTATTTAGTACTGTTCCAAC GAGGGATCACTTTAAATGGTACTATTCATTCTTGAACCAAAAATCACCATTTTCTTTAAGACAATATGGAGAACAACTAT GTCAACATAAAGGTTGGTCAAAAGATACAGTAAATTTCATGACACAGGTGTTTTTTGAGTTAGAATTTGTTACAATAAAA GATGGCGTCATTTTTATGGCAGACAAAAAACAAAAGCGTGATTTAATTGAATCGAACACATATCGTGAGAAAATGAACCA CTTACAATTAGAAAAAGAGTTGGTTTATAGCACATATCAGCAACTATATACATGGTTTGAAACGATTCGTAATCATAAAG AAGTAGAACAGCTAGGGTAA
Upstream 100 bases:
>100_bases TATTATTAACATTTTAGTATATAGATATTGCATCGTAGTTTGCATTATATTGTCACCCCTTAATCTGTCTTGTATAATGA ACAGGTTAAGGGGTGATTTC
Downstream 100 bases:
>100_bases AGGATTTGTATTTACAAACCTTTTAGATCTGAGGAGGATTCAGAAATATGGATTTCAAGCAACATATCGCAATTGTACCG GACTATCCAAAAGAAGGTAT
Product: single-stranded-DNA-specific exonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNG EQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKEL GIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLF ANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTELDEQYIVLLDLPTGTDELRD LFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLNQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
Sequences:
>Translated_779_residues MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNG EQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKEL GIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLF ANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTELDEQYIVLLDLPTGTDELRD LFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLNQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG >Mature_779_residues MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNG EQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKEL GIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLF ANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTELDEQYIVLLDLPTGTDELRD LFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLNQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]
COG id: COG0608
COG function: function code L; Single-stranded DNA-specific exonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OB DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=33.1569664902998, Blast_Score=261, Evalue=9e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR004610 - InterPro: IPR018779 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 88137; Mature: 88137
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP CCCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC FLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFT HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL CCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEE SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHH GIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA HHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCC GMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV CEEEECCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV CCCCCCEEEECCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCHHHEEE IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVL ECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHEEEEEECHHHH HKFSLEDYKEHMMHASEVTELDEQYIVLLDLPTGTDELRDLFKVGFPSRIYTLFYQENNH HHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCE LFSTVPTRDHFKWYYSFLNQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK EEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEE DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP CCCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC FLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFT HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL CCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEE SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHH GIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA HHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCC GMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV CEEEECCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV CCCCCCEEEECCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCHHHEEE IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVL ECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHEEEEEECHHHH HKFSLEDYKEHMMHASEVTELDEQYIVLLDLPTGTDELRDLFKVGFPSRIYTLFYQENNH HHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCE LFSTVPTRDHFKWYYSFLNQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK EEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEE DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]