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The map label for this gene is ytsP [H]

Identifier: 52140854

GI number: 52140854

Start: 4506135

End: 4506614

Strand: Direct

Name: ytsP [H]

Synonym: BCZK4397

Alternate gene names: 52140854

Gene position: 4506135-4506614 (Clockwise)

Preceding gene: 52140857

Following gene: 52140852

Centisome position: 85.01

GC content: 40.62

Gene sequence:

>480_bases
ATGTTTACTAAAGAAAGTTATGCAGGATCTCGCGTGCAGCAATATGAGACAGTAATAAAACAACTGGATGCATTATTAAC
TGGCGAATCAAACGTAGTCGCAAACTTATCAAATGCGTCCGCATTATTAAACCAATTTCTAGATCGCGTTAATTGGGTTG
GCTTTTACGTAACAGAAGGAAATCAGCTTGTTCTTGGGCCATTCCAAGGAATGCCTGCTTGCGTGCGCATTCCATTTGGA
AGAGGCGTTTGCGGCGTTGCAGCTGAAACGAAAGCTACGCAGCTTGTAGCAGATGTTCATCAATTCCCAGGACACATCGC
TTGCGACAGTGCTTCAAATTCAGAAATCGTCGTACCGATTATTAAAGATGGGAATGTCATTGGTGTACTTGATATTGATA
GTCCTGAAAAAAATCGTTTTGACGAAGTAGATCAGCGCTATTTAGAAAAATTTGTGGAAACACTCCTAAAACATATGTAA

Upstream 100 bases:

>100_bases
TTTAAGACAAATTCCTTTAATTTTCTATCGACAAAGTCATGTGAAATACATCGTATTTTGCTAATCTTTTACACATCTCG
ATAAAAAAGGAGCTGTTTCC

Downstream 100 bases:

>100_bases
CAAAAAAGAGCTAGTTATCGATTAAGTACATTACGTACAAAACCGATAGCTAGCTCTTTTTTTATTGATTACTAACAGTA
GATATTTTCTTTAACGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFTKESYAGSRVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTEGNQLVLGPFQGMPACVRIPFG
RGVCGVAAETKATQLVADVHQFPGHIACDSASNSEIVVPIIKDGNVIGVLDIDSPEKNRFDEVDQRYLEKFVETLLKHM

Sequences:

>Translated_159_residues
MFTKESYAGSRVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTEGNQLVLGPFQGMPACVRIPFG
RGVCGVAAETKATQLVADVHQFPGHIACDSASNSEIVVPIIKDGNVIGVLDIDSPEKNRFDEVDQRYLEKFVETLLKHM
>Mature_159_residues
MFTKESYAGSRVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTEGNQLVLGPFQGMPACVRIPFG
RGVCGVAAETKATQLVADVHQFPGHIACDSASNSEIVVPIIKDGNVIGVLDIDSPEKNRFDEVDQRYLEKFVETLLKHM

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=148, Percent_Identity=50, Blast_Score=154, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322781, Length=154, Percent_Identity=50.6493506493506, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17475; Mature: 17475

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKESYAGSRVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTEG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCEEEEEEECC
NQLVLGPFQGMPACVRIPFGRGVCGVAAETKATQLVADVHQFPGHIACDSASNSEIVVPI
CEEEEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEE
IKDGNVIGVLDIDSPEKNRFDEVDQRYLEKFVETLLKHM
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFTKESYAGSRVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTEG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCEEEEEEECC
NQLVLGPFQGMPACVRIPFGRGVCGVAAETKATQLVADVHQFPGHIACDSASNSEIVVPI
CEEEEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEE
IKDGNVIGVLDIDSPEKNRFDEVDQRYLEKFVETLLKHM
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]