Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 52140794

GI number: 52140794

Start: 4560107

End: 4561378

Strand: Direct

Name: ytfP [H]

Synonym: BCZK4458

Alternate gene names: 52140794

Gene position: 4560107-4561378 (Clockwise)

Preceding gene: 52140795

Following gene: 52140793

Centisome position: 86.02

GC content: 39.39

Gene sequence:

>1272_bases
ATGCATTATGATGTTATTGTCATCGGCGGCGGGCCTTCTGGGCTAATGGCTGCAATCGGTGCTGCAGAAGAAGGCGCAAG
CGTCTTACTTCTTGATAAAGGAAATAAACTAGGGCGTAAACTTGCGATTTCAGGTGGTGGCCGTTGTAACGTAACGAACC
GTCTACCACTTGATGAGATCGTTAAACATATACCAGGAAATGGCCGCTTCTTATACAGCGCTTTTTCTATTTTTAATAAT
GAAGATATTATTACATTCTTCGAAAATCTTGGTGTAAAACTGAAAGAAGAGGATCATGGCCGCATGTTCCCTGTTTCAAA
TAAAGCGCAATCGGTAGTAGACGCACTTTTAACCCGATTAAAAGATTTAGGTGTAAAGATCCGCACAAATACACCTGTTG
AAACGATTGAATATGAAAATGGTCAAACGAAAGCAGTCGTACTAAAGACTGGCGAAGTGCTAGAAACAAATCACGTCGTT
ATCGCTGTTGGCGGAAAATCTGTTCCTCAAACTGGTTCTACTGGCGACGGATATGCTTGGGCTAAAAAAGCTGGACATAC
AATTACAGAATTATTCCCAACAGAAGTACCCATCCTTTCAAACGAACCATTTATTCAAGATCGTTCATTACAAGGACTTG
CTTTACGAGACGTAAACTTAAGTGTATTAAACCCGAAAGGAAAAGCTATCATTTCTCACAAAATGGACATGCTCTTCACT
CACTTCGGTTTATCTGGCCCTGCTGCCCTTCGCTGTAGTCAATTCGTTGTAAAAGCACTGAAGAAGTTCAAAACGAATAC
AGTGCAAATGAGCATCGATGCATTGCCAGAAGAAAATAGTGAACAACTATTCCAGCGCATGCTGAAACAAATGAAAGAAG
ATCCGAAAAAAGGAATTAAAAACGTGTTAAAAGGTTATGTACCTGAACGTTACTTCCTATTCTTATTAGAAAAAAATGAA
ATTGACGGTAGCGAACAAGCTGGACAAGTTTCTCACGAAAAAATTCGTGCACTTGTGAAAGACTTTAAAGAATTTACTGT
AAATGTAAATGGTACGCAGTCAATTGAAAAAGCATTCGTTACTGGCGGCGGTGTATCTGTTAAAGAAATTAACCCAAAAG
AAATGTCTTCTAAATTCACGAACGGCTTATATTTCTGCGGGGAAGTTCTTGATATTCACGGTTATACTGGTGGCTATAAT
ATTACATCTGCTCTCGTTACTGGTAGAATTGCCGGAACAACAGCTGGAGAAAATGCGAAAATGCAATATTAA

Upstream 100 bases:

>100_bases
CACAATTCTCTCCTTAAGCAGTACTTCACTCTATTTTTCTTTTAAGGGAAAACATGCTATTCTTTTAGGCAGGAAATGTA
GAAAATGAGGTCGATATATT

Downstream 100 bases:

>100_bases
ACTGAGAAACAGGGATTCCTGTTTCTTTTTTTATAGGTACATGAAATTATTATCGACGATTACACAAATATATCAGCGAT
TCTGTAATTTTATCGGCGAT

Product: NAD(FAD)-utilizing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY

Sequences:

>Translated_423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY
>Mature_423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=386, Percent_Identity=31.0880829015544, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46114; Mature: 46114

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI
CCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCHHHH
VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRL
HHHCCCCCEEEEEEEHHHCCCCCEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
KDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAW
HHCCEEEECCCCCEEEEECCCCEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCHH
AKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEHHHHHHHHHH
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH
NVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFV
HHHHHCCCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
TGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK
CCCCEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEECCCCCCCCC
MQY
CCC
>Mature Secondary Structure
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI
CCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCHHHH
VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRL
HHHCCCCCEEEEEEEHHHCCCCCEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
KDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAW
HHCCEEEECCCCCEEEEECCCCEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCHH
AKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEHHHHHHHHHH
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH
NVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFV
HHHHHCCCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
TGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK
CCCCEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEECCCCCCCCC
MQY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]