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The map label for this gene is gerHA [H]

Identifier: 52140770

GI number: 52140770

Start: 4578588

End: 4580795

Strand: Direct

Name: gerHA [H]

Synonym: BCZK4483

Alternate gene names: 52140770

Gene position: 4578588-4580795 (Clockwise)

Preceding gene: 52140779

Following gene: 52140769

Centisome position: 86.37

GC content: 36.28

Gene sequence:

>2208_bases
ATGATTTGGAATTGGCTACGTAAGAAAAAAAAATCAAATACAACAGAGAAAAACGAAACAGATAATTCGGAGCAAAAACC
TAACAATCAAGAGGATGACAACAAAGAACAGACTAGAAGTACGAAACATAATAAAGGTAACAATAGCGAGCAAAAAAAAG
AGGAACACAAGGAATCTTCTCAAGGTAATCAGCAAAATCAATCGAATCAAAATCAGCAACAAAGTGCTAAACAAGATGAA
TCTTCTCAAGAGCAACAGAAACATTCTAAGCAGAACGACTCCAATCAGGGTCAACAACAACACTCTAAACAAGACGACTC
GAATCAGGATCAACAACAACACTCTAAGCAAGACGACTCCAATCAGGGTCAACAACAACACTCTAAGCAAGACGACTCGA
ATCAGGATCAACAACAACAACAACACTCTAAGCAAGACAACTCGAATCAGGATCAACAACAACACTCTAAACAAGACGAC
TCCAATCAGGATCAACAACACTCTAAGCAAGACAACTCGAATCAGGATCAACAACAACACTCTAAGCAAGACGACTCGAA
TCAAGGGCAACAGAATCATTCTAAGCAAGACGACTCCGATCAGGATGATTCATCCCAGGATAAGCAGCAAAGCTCCAAGC
AAGATGATTTAGCACAAGATAAACAGCAACACTCTAAACAAGACAACTCAGATCAGGATAAACAGCAAAATTCTAAAGGT
AATAGTATTTATGATTTTTCGAAACCAGAAAAAGATCGTATTCATTCTTTACAAGATTTAATAGAAAAACTGAAAAAGTC
TAGTGATTTTGTGAATTATCATACATCTGACGATGAAACGATGCCTTATTGGATTTCTTACTATCGTCCTTCACTTGATG
GTGAGAAATTGCAAAAATATTTAATGCCTACTCTTTTGGAACGACCTAACACATCACTAGAAGAGCTGAAGGAACATATT
CCAATGAGCGGCATTACAATTACGAACGATTTACAAAAAATTGAGGACATGGTTTTAAAGGGGCATGCGATTGTTCAAGT
AAATCAACAAGATCAAAAATGTATGCTCGCAAATATTGCAATTGATAATTATCGTGCGCCAACTCCTCCTTTAAACGAAT
CAACTGTTATTGGTCCGCAAGAAGGTTTTGTAGAGGACATTGATACAAATATTAATTTAGTTCGAAAACGTCTTCCTGTT
TTAGATTTACAAACAAAAGAAATGATTGTCGGTGAATTTTCCAAAACAAAAGTTGTCATGATGTATTTAGACAACCTCGC
CGAAAAAGATAATGTAGATTTTCTAGAAGAGTCTTTACGTGCTCTTGAATATGATCAAATTAATGATAGTGCTTATATAC
AAGAATTGATGGGAGAAAAGTCGATTTTTCCTCTTTATATCAATACAGAACGCACTGATAGAGTGACAAAAGCACTAATC
GATGGAAAAATCGCTATTTTCGTGGACGGTTCTCCAAGTGTTTTATTAACACCTGTATCCTATTTCGATTTTTTCATTTC
ACCAGAAGACTACAACGTCTCTTGGCTATACGCTACATTTTCAAGGATTTTACGCCTTATCGCCGTTCTATTCTCGATAT
GCGCTACACCTTTATACGTTGCAGTTTTAAATTATCATTATGAACTCATTCCGAGTGATTTGCTTGAAACTTTAATTTTA
TCAAGAGCACAAGTACCATTCCCACCTTTAATTGAAGCTCTCTTTTTAGAACTCGCAATCGATTTACTAAGAGAAGCTGG
CGCGAGGTTACCGATGAAAGTTGGTCAAACGCTTGGCATTGTAGGCGGTATCGTAATTGGGCAAGCATCTGTACAAGCTG
GTTTAACGAGTAATATTTTATTAATTATTGTCGCCTTATCAGCACTCGCTTCCTTTATTACACCTATTTATAAAATGGGT
AATGCGGTTCGATTACTGCGCTTCCCGTTTCTCATATTTGCAGAAATAGGAGGACTTTTCGGGATTTCTCTTGGATTTAT
CTTTTTATTTACTCATCTATTTAGACTTACTTCCTTACGTAAGCCATACGCTTTGTTTTATCCAACAAGACAACAATCTG
TTAAAGATTCTTGGATTCGTTTCCCTTTAACAATGATTGATACACGTGATGTACAAGCAAGGCCACAACATGTAAAAAAA
TCAGCAAAAGGAATTTCAACGAAACATAGATCCGACTTTGATGATTAA

Upstream 100 bases:

>100_bases
TATGCAAACCAATCTCCTCCTTCTTTTCATAAATAAATGAATAATATACAAAATTAGCCACAAAATAGCACTATATTACA
CAATCAAAGAGGGCATACAT

Downstream 100 bases:

>100_bases
GAAATGAGGTGCATTGGATGAGTAAGGTTCAAGAAAAATACCAAATATCTCCTATCTTTGTTTTCTTCTTAATTCACGGT
GCACAGTTTGGAGCTGGCGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKGNNSEQKKEEHKESSQGNQQNQSNQNQQQSAKQDE
SSQEQQKHSKQNDSNQGQQQHSKQDDSNQDQQQHSKQDDSNQGQQQHSKQDDSNQDQQQQQHSKQDNSNQDQQQHSKQDD
SNQDQQHSKQDNSNQDQQQHSKQDDSNQGQQNHSKQDDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKG
NSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPNTSLEELKEHI
PMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPV
LDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALI
DGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLIL
SRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMG
NAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKK
SAKGISTKHRSDFDD

Sequences:

>Translated_735_residues
MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKGNNSEQKKEEHKESSQGNQQNQSNQNQQQSAKQDE
SSQEQQKHSKQNDSNQGQQQHSKQDDSNQDQQQHSKQDDSNQGQQQHSKQDDSNQDQQQQQHSKQDNSNQDQQQHSKQDD
SNQDQQHSKQDNSNQDQQQHSKQDDSNQGQQNHSKQDDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKG
NSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPNTSLEELKEHI
PMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPV
LDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALI
DGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLIL
SRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMG
NAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKK
SAKGISTKHRSDFDD
>Mature_735_residues
MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKGNNSEQKKEEHKESSQGNQQNQSNQNQQQSAKQDE
SSQEQQKHSKQNDSNQGQQQHSKQDDSNQDQQQHSKQDDSNQGQQQHSKQDDSNQDQQQQQHSKQDNSNQDQQQHSKQDD
SNQDQQHSKQDNSNQDQQQHSKQDDSNQGQQNHSKQDDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKG
NSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPNTSLEELKEHI
PMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPV
LDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALI
DGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLIL
SRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMG
NAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKK
SAKGISTKHRSDFDD

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 84247; Mature: 84247

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKGNNSEQKKEEHKESS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
QGNQQNQSNQNQQQSAKQDESSQEQQKHSKQNDSNQGQQQHSKQDDSNQDQQQHSKQDDS
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCCCC
NQGQQQHSKQDDSNQDQQQQQHSKQDNSNQDQQQHSKQDDSNQDQQHSKQDNSNQDQQQH
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH
SKQDDSNQGQQNHSKQDDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKG
HCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
NSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
LMPTLLERPNTSLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIA
HHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHEE
IDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIVGEFSKTKVVM
CCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH
MYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALI
HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
DGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYV
CCCEEEEECCCCCEEEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGI
HHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKK
HHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHH
SAKGISTKHRSDFDD
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MIWNWLRKKKKSNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKGNNSEQKKEEHKESS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
QGNQQNQSNQNQQQSAKQDESSQEQQKHSKQNDSNQGQQQHSKQDDSNQDQQQHSKQDDS
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCCCC
NQGQQQHSKQDDSNQDQQQQQHSKQDNSNQDQQQHSKQDDSNQDQQHSKQDNSNQDQQQH
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH
SKQDDSNQGQQNHSKQDDSDQDDSSQDKQQSSKQDDLAQDKQQHSKQDNSDQDKQQNSKG
HCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
NSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
LMPTLLERPNTSLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIA
HHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHEE
IDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIVGEFSKTKVVM
CCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH
MYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALI
HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
DGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYV
CCCEEEEECCCCCEEEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGI
HHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKK
HHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHH
SAKGISTKHRSDFDD
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]