Click here to switch to the map view.

The map label for this gene is gerPF [H]

Identifier: 52140704

GI number: 52140704

Start: 4640262

End: 4640477

Strand: Reverse

Name: gerPF [H]

Synonym: BCZK4549

Alternate gene names: 52140704

Gene position: 4640477-4640262 (Counterclockwise)

Preceding gene: 52140705

Following gene: 52140707

Centisome position: 87.54

GC content: 37.96

Gene sequence:

>216_bases
ATGCCGTCAGTTGTGGAAGGTGTTATTATCGAAAACTGTAACGGAACGATTAATTTAGGAGATAAATATAACGTGCAGCC
GATTGAAAAAACGAAAGCTTATAATGGATCGGGATCATCGAATACAGGGATTAAAGTACAAACATTTAGCGGGATTAGTA
CAGCAGATGTAGGGGATAGTGATGCGAATGACCAAGGGATACAATTTACTTTATAG

Upstream 100 bases:

>100_bases
AAAAAGCACTCAGTTTGAGTGCTTTTTTCTTATGGAAACATGCTATTTTGTTAGGCGCTTTTCATAAAATGAAAGTAAGG
AAATGAAAGTGGGTGAAAAA

Downstream 100 bases:

>100_bases
AGAAATATGCAAAGTTGCATAAAATGATGAACTTGCCCTGTGCTACAATCTAACTGTGAGCTGTTAATGATTCTTCTGTA
TTATAGTTGTTAGATTAGAA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Sequences:

>Translated_71_residues
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL
>Mature_70_residues
PSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7410; Mature: 7279

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDS
CCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCC
DANDQGIQFTL
CCCCCCEEEEC
>Mature Secondary Structure 
PSVVEGVIIENCNGTINLGDKYNVQPIEKTKAYNGSGSSNTGIKVQTFSGISTADVGDS
CCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCC
DANDQGIQFTL
CCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]