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The map label for this gene is lytR [H]

Identifier: 52140367

GI number: 52140367

Start: 4979463

End: 4980590

Strand: Direct

Name: lytR [H]

Synonym: BCZK4892

Alternate gene names: 52140367

Gene position: 4979463-4980590 (Clockwise)

Preceding gene: 52140369

Following gene: 52140365

Centisome position: 93.94

GC content: 37.32

Gene sequence:

>1128_bases
ATGGAAGAACGTTATTATCATCTCCAAAATAGCAGAATAAAAAAGAAACGAAGAAGAAAGTTTTTCTACTTCCTTATTTT
CTTATTTTTATTTGGTAGTGTAGGACTTTATATATTAAATTCCTACTCTTCTCTCATGGGGATGTATAGTGGTTTTACTC
GTGAAAAGTCGGATTTGAGAACCGAAGATGTAGAAATTACAAAGGAGCCTTTTACACTCCTTATTATGGGGATAGAAGAT
TATGCAACAGACGGACAAAACGGTCGTACAGATTCAATAATGTTTGCGACAGTCAATCCGAAAACGCAAAAAATTTCGCT
TATGAGTATCCCTCGTGATAGTCGCGTTCCCATTGTCGGAAAGAATAAAGAGGACAAAATTAACGCTGCGCATGCTTACG
GCGGAGAAGAAATGGCAATCAAAACTGTCGAAGGTTTTCTAAAAGTGCCTGTAGACCATTATCTTAAAATTGATTTCCAA
GGCTTTAAAGGTATTGTTGATGCTGTTGGCGGTGTTACTGTTGATGTCCCCTTCGACTTTTGGGAGCGTTCAGACGTGGA
TTACTACAAAAAAATCGAATTTAAGCAAGGGCAACAAGAATTAAATGGTGAAGAAGCACTCGCTTACGTTCGTATGCGAA
AGCAAGATCCGAATGGCGACTATGGTCGGGCCGCTAGACAAAGACAATTACTAGCTGCTGTTGCTCAAAAACTAAATTCT
ACCTCTACTGTATTTAAAATTAAAGATTTGACAGCAGTCGTTGGAAAATATATAAAAACTGACATTCCTATTTCAGATGG
CCTTGCTCTTTACAATAAACTTTCTGGATTTGATCCTTCTACAATACAAACGTTCAAACTGGAAGGAGAAGATAAAAAAA
TAGGTGGTATTTATTACTTCCTTCCAGATCCAAACGGTGTTGAGGCAGTACGTAACGAAATTAAAAAAGAATTAGGAGAA
AAGGTAAACACGCAAGAAAATACAACAACAAAAACCGAATCAAATCCTTCTTCAAATTCTAACTCGAACGAAAAAGCGAA
GAAAGAAACGAATCAGGACAAAACACCAACTGATCCCCCTCCTTCTACGAATGCTCATGCAGAGTGGATTATGAGAAATC
AGCAATAA

Upstream 100 bases:

>100_bases
TGTACTTAGAACAAGATGTTATCTAAGAATAACTACTTTATCGCCTTTAAAGATTAATGTAGTGAATTACTTTCCTACAA
ATGAACTAAGGAGATTATAT

Downstream 100 bases:

>100_bases
AAAAAGGGCCAAATCGCATGCGATTTGGCTCTTTTTTATTTATTAAAGTGTTTTAAAATTGCTTCTACAATACGCTCTGA
TGCACGGCCATCACCGTACG

Product: LytR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIED
YATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQ
GFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQQELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNS
TSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGE
KVNTQENTTTKTESNPSSNSNSNEKAKKETNQDKTPTDPPPSTNAHAEWIMRNQQ

Sequences:

>Translated_375_residues
MEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIED
YATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQ
GFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQQELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNS
TSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGE
KVNTQENTTTKTESNPSSNSNSNEKAKKETNQDKTPTDPPPSTNAHAEWIMRNQQ
>Mature_375_residues
MEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLRTEDVEITKEPFTLLIMGIED
YATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVGKNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQ
GFKGIVDAVGGVTVDVPFDFWERSDVDYYKKIEFKQGQQELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNS
TSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYFLPDPNGVEAVRNEIKKELGE
KVNTQENTTTKTESNPSSNSNSNEKAKKETNQDKTPTDPPPSTNAHAEWIMRNQQ

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 42583; Mature: 42583

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLR
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
TEDVEITKEPFTLLIMGIEDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVG
CCCCEEECCCEEEEEEECHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEC
KNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDF
CCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCEEEEECCCC
WERSDVDYYKKIEFKQGQQELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNS
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYF
CCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEECEEEEE
LPDPNGVEAVRNEIKKELGEKVNTQENTTTKTESNPSSNSNSNEKAKKETNQDKTPTDPP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PSTNAHAEWIMRNQQ
CCCCCCHHHHEECCC
>Mature Secondary Structure
MEERYYHLQNSRIKKKRRRKFFYFLIFLFLFGSVGLYILNSYSSLMGMYSGFTREKSDLR
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
TEDVEITKEPFTLLIMGIEDYATDGQNGRTDSIMFATVNPKTQKISLMSIPRDSRVPIVG
CCCCEEECCCEEEEEEECHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEC
KNKEDKINAAHAYGGEEMAIKTVEGFLKVPVDHYLKIDFQGFKGIVDAVGGVTVDVPFDF
CCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCEEEEECCCC
WERSDVDYYKKIEFKQGQQELNGEEALAYVRMRKQDPNGDYGRAARQRQLLAAVAQKLNS
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TSTVFKIKDLTAVVGKYIKTDIPISDGLALYNKLSGFDPSTIQTFKLEGEDKKIGGIYYF
CCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEECEEEEE
LPDPNGVEAVRNEIKKELGEKVNTQENTTTKTESNPSSNSNSNEKAKKETNQDKTPTDPP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PSTNAHAEWIMRNQQ
CCCCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]