| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is apaH [H]
Identifier: 51894435
GI number: 51894435
Start: 3527248
End: 3527859
Strand: Reverse
Name: apaH [H]
Synonym: STH3301
Alternate gene names: 51894435
Gene position: 3527859-3527248 (Counterclockwise)
Preceding gene: 51894437
Following gene: 51894434
Centisome position: 98.93
GC content: 65.52
Gene sequence:
>612_bases GTGGTTTCAGACATTCACGGCGAGAGCCGACGGCTGTTGAAGGTACTGGAGATGGCCCACTACAACCCGTCGACTGACCG TCTCTTCCTGCTGGGCGACTACATCGACCGGGGGTCGGACTCCAAAGGGACGCTGGAGATCGTGGAGCGGCTGGTCCGCA GCGGGGCCGTCGCCCTGCTCGGCAATCACGACCTGATGCTGGTCAGCACCTATTACGACCCGAGCAACCTGCAGCGGTGG GTCTACAACGGCGGGTACACGACGCTGGCGGAGTTCGGCGGCTTCATCCCGGAACGGTGGGTGCGGTTCCTGGAAGGGCT GCCCACCCATCACGAGGAGCCGGACTGCATCATGGTGCATGCGGGCCTGGCCCCCGGCGTGCCGCTCAGCGAACAGTCCG ATCAGGACAAGGTGTGGATCCGGGAGCCGTTTCTCAGCCAGTATCGCGGCAAGCGGGTCTACTTCGGCCACACCCCCACC TGCCTGCTGCACGGGGAGGAACGGTGGGAACCGTGGTACGGCGAGGACAAGGTCGGAATCGACACCGGCGCCGTGTACGG CGGCGTCCTGACTCTGCTGGACATCGACACCGGCCAGGTCTGGACGGCGTGA
Upstream 100 bases:
>100_bases CTGAGCGAACGTAAGCCATGTTTCACTGAATCATACAGTAGGGCGGAAGCTCATCGCACTCGGCCGAAAGGAGGCGGTCA GTCTGGCACGGCGCAGGCTG
Downstream 100 bases:
>100_bases CGCCCCAGTCGTCATCCCGTTCCCTCGTCGGACTACACCCGACCGGAGGCGGTCGGGTTTTTCATGTGCGTGCTCAGTCT GCCAGGATCGGCCCCTCCCG
Product: putative serine/threonine protein phosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVSDIHGESRRLLKVLEMAHYNPSTDRLFLLGDYIDRGSDSKGTLEIVERLVRSGAVALLGNHDLMLVSTYYDPSNLQRW VYNGGYTTLAEFGGFIPERWVRFLEGLPTHHEEPDCIMVHAGLAPGVPLSEQSDQDKVWIREPFLSQYRGKRVYFGHTPT CLLHGEERWEPWYGEDKVGIDTGAVYGGVLTLLDIDTGQVWTA
Sequences:
>Translated_203_residues MVSDIHGESRRLLKVLEMAHYNPSTDRLFLLGDYIDRGSDSKGTLEIVERLVRSGAVALLGNHDLMLVSTYYDPSNLQRW VYNGGYTTLAEFGGFIPERWVRFLEGLPTHHEEPDCIMVHAGLAPGVPLSEQSDQDKVWIREPFLSQYRGKRVYFGHTPT CLLHGEERWEPWYGEDKVGIDTGAVYGGVLTLLDIDTGQVWTA >Mature_203_residues MVSDIHGESRRLLKVLEMAHYNPSTDRLFLLGDYIDRGSDSKGTLEIVERLVRSGAVALLGNHDLMLVSTYYDPSNLQRW VYNGGYTTLAEFGGFIPERWVRFLEGLPTHHEEPDCIMVHAGLAPGVPLSEQSDQDKVWIREPFLSQYRGKRVYFGHTPT CLLHGEERWEPWYGEDKVGIDTGAVYGGVLTLLDIDTGQVWTA
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 22968; Mature: 22968
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDIHGESRRLLKVLEMAHYNPSTDRLFLLGDYIDRGSDSKGTLEIVERLVRSGAVALL CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEE GNHDLMLVSTYYDPSNLQRWVYNGGYTTLAEFGGFIPERWVRFLEGLPTHHEEPDCIMVH CCCCEEEEEEEECCCHHHEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEE AGLAPGVPLSEQSDQDKVWIREPFLSQYRGKRVYFGHTPTCLLHGEERWEPWYGEDKVGI CCCCCCCCCCCCCCCCCEEEECHHHHHHCCCEEEECCCCEEEEECHHHCCCCCCCCCCCC DTGAVYGGVLTLLDIDTGQVWTA CCCHHHCCEEEEEECCCCCEECC >Mature Secondary Structure MVSDIHGESRRLLKVLEMAHYNPSTDRLFLLGDYIDRGSDSKGTLEIVERLVRSGAVALL CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEE GNHDLMLVSTYYDPSNLQRWVYNGGYTTLAEFGGFIPERWVRFLEGLPTHHEEPDCIMVH CCCCEEEEEEEECCCHHHEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEE AGLAPGVPLSEQSDQDKVWIREPFLSQYRGKRVYFGHTPTCLLHGEERWEPWYGEDKVGI CCCCCCCCCCCCCCCCCEEEECHHHHHHCCCEEEECCCCEEEEECHHHCCCCCCCCCCCC DTGAVYGGVLTLLDIDTGQVWTA CCCHHHCCEEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA