| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is baeS [H]
Identifier: 51894423
GI number: 51894423
Start: 3513331
End: 3514677
Strand: Reverse
Name: baeS [H]
Synonym: STH3289
Alternate gene names: 51894423
Gene position: 3514677-3513331 (Counterclockwise)
Preceding gene: 51894424
Following gene: 51894421
Centisome position: 98.56
GC content: 73.87
Gene sequence:
>1347_bases ATGCGCAGCCTTAGTCTGGTCGCCCGGTTCTGGCTCTCCCTCTCCCTGCTCCTGCTCGTCGTGCTCGTCCCCATGGAGTA CGCCCTGGACCAGCTGCTGGAGCGCTTCTACGCCACGCAGGTCACGGAGCCCCTCCTCTACCACGGCCGGCAACTCGCGG ACATGCTGGCCGCAGAGGACGCGGCGCTGGCCGCCGCACCGCTCATGGCCGAGATGGTGGGGGGCGAGGTGGTGGTGCTG GACCGGGAAGGAAGGCCGCGGTCCTTCCCGGGCGCCTCCGCGGTCGAGGTGCCCGAGGACATCCGGCGGGCGGTGGTCGT CGGACGGACCCATGTGGACCAGCTGCGGACCCCGGAGGGAGCCACCTACATCGTCACCGGCGTGCCGGTCCAGGGGGGCG AAGGAGGAGTGCTGCTGCTGGCGCCCGCCGATCCCCTCCGGCAGTCGTTCGACAGGGCCCGGCGCGGCCTGTGGCTGGCC GGCGCCGCCGCGCTCCTGCTGGGCACGGGGCTCGCGCTGGTGATGGCCCGGAGCCTCACCCGCCCCGTGCTGGCGATGGA ACGGGCGACCCGGGCCATCGCGCGCGGCGACTTCTCGGCGCGCGTGGCCCCGGCGGGCGCTAACGAGCTGGGCCGCCTCG GCGAGGCGATCAACCGGATGGCGGAACAGCTGGAGGGCCACGAGCGCCGCCGGCGGGAGTTCCTGGCTGACGTGGCCCAC GAGCTGCGCACGCCGCTGTCGTACATCCGCGGGTATACCCAGGCCCTGGCCGAGGGGGTCGTGACCGATCCTGCGGAGGT CCGGCGATTCCAACGGGTGGTGATGGACGAGGTCGACCGGCTGAGCCGCCTCGTGGACGACCTGATGGACCTGGCGCAGA TCGAAGAGGGGCAGATGGCCTTCGAGCGGGTGCCGCTGGATCTGCGCGTGCCGGTGGAGCAGGCGGTCCGGACCGTGCGG TCGCAGGCGGAGGAGAAGGGCGTCGCCCTGGTGGTGGGCCTCCCGGACGCGCTGCCCCCCGTCCTCGCCGACGGCGGCCG GATTCAGCAGGTGGTCTTCAACCTGCTGGACAACGCCCTGCGCCATACCCCGCCGGGAGGCGTGGTGCGGGTGTCCGCCG CGGTCACGAGGGACGCCGTGGCGGTCCGGGTGCGGGACACGGGGGAGGGCATCGACCCGGCTCAGCTTCCCCACGTGTTC GACCGCTTCCGCGGCCGGCGGAAGGGCGGCCGGGGGCTCGGTCTGGCGGTGGTGCGCTCCATCGTCCGGGCGCACGGCGG TGACGTCGGCGTGGAGTCCCGTCCCGGCGGGGGCGCCGCCTTCTGGTTCTGGCTGCCGCGGGCCTGA
Upstream 100 bases:
>100_bases GTGGACGCCCACATCAAGAACCTGCGGGACAAGCTGGGCGAGGGCGCGGGGCTCATCCTCACGGTCTGGGGCGTGGGGTA CCGGTTCGCGGAGGTGCCGG
Downstream 100 bases:
>100_bases GGGCAGGGCGCGGAGCGGCCAACGGAAAACGAGCACCCGGTCAGGGGTGCTCGTTCAGGTCTGCGGATCCGGGGACGCGC GCTGGATCACTGGTCAGGCG
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MRSLSLVARFWLSLSLLLLVVLVPMEYALDQLLERFYATQVTEPLLYHGRQLADMLAAEDAALAAAPLMAEMVGGEVVVL DREGRPRSFPGASAVEVPEDIRRAVVVGRTHVDQLRTPEGATYIVTGVPVQGGEGGVLLLAPADPLRQSFDRARRGLWLA GAAALLLGTGLALVMARSLTRPVLAMERATRAIARGDFSARVAPAGANELGRLGEAINRMAEQLEGHERRRREFLADVAH ELRTPLSYIRGYTQALAEGVVTDPAEVRRFQRVVMDEVDRLSRLVDDLMDLAQIEEGQMAFERVPLDLRVPVEQAVRTVR SQAEEKGVALVVGLPDALPPVLADGGRIQQVVFNLLDNALRHTPPGGVVRVSAAVTRDAVAVRVRDTGEGIDPAQLPHVF DRFRGRRKGGRGLGLAVVRSIVRAHGGDVGVESRPGGGAAFWFWLPRA
Sequences:
>Translated_448_residues MRSLSLVARFWLSLSLLLLVVLVPMEYALDQLLERFYATQVTEPLLYHGRQLADMLAAEDAALAAAPLMAEMVGGEVVVL DREGRPRSFPGASAVEVPEDIRRAVVVGRTHVDQLRTPEGATYIVTGVPVQGGEGGVLLLAPADPLRQSFDRARRGLWLA GAAALLLGTGLALVMARSLTRPVLAMERATRAIARGDFSARVAPAGANELGRLGEAINRMAEQLEGHERRRREFLADVAH ELRTPLSYIRGYTQALAEGVVTDPAEVRRFQRVVMDEVDRLSRLVDDLMDLAQIEEGQMAFERVPLDLRVPVEQAVRTVR SQAEEKGVALVVGLPDALPPVLADGGRIQQVVFNLLDNALRHTPPGGVVRVSAAVTRDAVAVRVRDTGEGIDPAQLPHVF DRFRGRRKGGRGLGLAVVRSIVRAHGGDVGVESRPGGGAAFWFWLPRA >Mature_448_residues MRSLSLVARFWLSLSLLLLVVLVPMEYALDQLLERFYATQVTEPLLYHGRQLADMLAAEDAALAAAPLMAEMVGGEVVVL DREGRPRSFPGASAVEVPEDIRRAVVVGRTHVDQLRTPEGATYIVTGVPVQGGEGGVLLLAPADPLRQSFDRARRGLWLA GAAALLLGTGLALVMARSLTRPVLAMERATRAIARGDFSARVAPAGANELGRLGEAINRMAEQLEGHERRRREFLADVAH ELRTPLSYIRGYTQALAEGVVTDPAEVRRFQRVVMDEVDRLSRLVDDLMDLAQIEEGQMAFERVPLDLRVPVEQAVRTVR SQAEEKGVALVVGLPDALPPVLADGGRIQQVVFNLLDNALRHTPPGGVVRVSAAVTRDAVAVRVRDTGEGIDPAQLPHVF DRFRGRRKGGRGLGLAVVRSIVRAHGGDVGVESRPGGGAAFWFWLPRA
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=329, Percent_Identity=36.7781155015198, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1789149, Length=343, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=35.7446808510638, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1786783, Length=274, Percent_Identity=33.9416058394161, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788549, Length=215, Percent_Identity=33.4883720930233, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI87081816, Length=344, Percent_Identity=30.2325581395349, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=32.2709163346614, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI145693157, Length=250, Percent_Identity=32, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1786600, Length=285, Percent_Identity=30.5263157894737, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1790861, Length=296, Percent_Identity=31.4189189189189, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790346, Length=292, Percent_Identity=28.7671232876712, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787894, Length=301, Percent_Identity=29.5681063122924, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=29.4871794871795, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788279, Length=274, Percent_Identity=26.2773722627737, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=28.1938325991189, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789808, Length=290, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790300, Length=226, Percent_Identity=30.0884955752212, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082128, Length=306, Percent_Identity=26.797385620915, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789403, Length=234, Percent_Identity=29.0598290598291, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=282, Percent_Identity=26.5957446808511, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787374, Length=286, Percent_Identity=25.5244755244755, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790567, Length=134, Percent_Identity=32.089552238806, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48600; Mature: 48600
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLSLVARFWLSLSLLLLVVLVPMEYALDQLLERFYATQVTEPLLYHGRQLADMLAAED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AALAAAPLMAEMVGGEVVVLDREGRPRSFPGASAVEVPEDIRRAVVVGRTHVDQLRTPEG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC ATYIVTGVPVQGGEGGVLLLAPADPLRQSFDRARRGLWLAGAAALLLGTGLALVMARSLT CEEEEEECEEECCCCCEEEEECCHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHH RPVLAMERATRAIARGDFSARVAPAGANELGRLGEAINRMAEQLEGHERRRREFLADVAH HHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLSYIRGYTQALAEGVVTDPAEVRRFQRVVMDEVDRLSRLVDDLMDLAQIEEGQMA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH FERVPLDLRVPVEQAVRTVRSQAEEKGVALVVGLPDALPPVLADGGRIQQVVFNLLDNAL HHHCCCCEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHH RHTPPGGVVRVSAAVTRDAVAVRVRDTGEGIDPAQLPHVFDRFRGRRKGGRGLGLAVVRS HCCCCCCEEEEEHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IVRAHGGDVGVESRPGGGAAFWFWLPRA HHHHCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MRSLSLVARFWLSLSLLLLVVLVPMEYALDQLLERFYATQVTEPLLYHGRQLADMLAAED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AALAAAPLMAEMVGGEVVVLDREGRPRSFPGASAVEVPEDIRRAVVVGRTHVDQLRTPEG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC ATYIVTGVPVQGGEGGVLLLAPADPLRQSFDRARRGLWLAGAAALLLGTGLALVMARSLT CEEEEEECEEECCCCCEEEEECCHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHH RPVLAMERATRAIARGDFSARVAPAGANELGRLGEAINRMAEQLEGHERRRREFLADVAH HHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLSYIRGYTQALAEGVVTDPAEVRRFQRVVMDEVDRLSRLVDDLMDLAQIEEGQMA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH FERVPLDLRVPVEQAVRTVRSQAEEKGVALVVGLPDALPPVLADGGRIQQVVFNLLDNAL HHHCCCCEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHH RHTPPGGVVRVSAAVTRDAVAVRVRDTGEGIDPAQLPHVFDRFRGRRKGGRGLGLAVVRS HCCCCCCEEEEEHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IVRAHGGDVGVESRPGGGAAFWFWLPRA HHHHCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]