Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is mltD [C]

Identifier: 51894401

GI number: 51894401

Start: 3487118

End: 3488482

Strand: Reverse

Name: mltD [C]

Synonym: STH3267

Alternate gene names: 51894401

Gene position: 3488482-3487118 (Counterclockwise)

Preceding gene: 51894402

Following gene: 51894400

Centisome position: 97.82

GC content: 75.9

Gene sequence:

>1365_bases
ATGGTCTTCTACTTCGTGCAGCCAGGGGAGACGCTGTTCGCCATCGCCAGGCGTTACCGGACCACCGTTCACGCCCTGGT
CACCGCCAACCGGCTGAAGGATCCCAACGCCATCAGCCCGGGCCAGGCGCTGCTGATCCCCCGCCCCGGAGAGCGGCCGT
CGCCGCCACCGGGGGGCGTCGTGCACCGCGTGCGCAGGGGCGAGACGGCCCTGACCCTGGCGGCCCGCTACGGGACCACG
GTGAAGGCCATCATGCTGGCCAACCAGCTGGCTCACCCGGAGTTCGTCGAGCCGGGTCAGCGGCTGGTGATCCCGGAGCC
GCCGGAGCCGGGGACCGACTGGCCCATGCTGGGGCGGGACCCCCGCCGCGCATCGGACAGCCCGGCGGCGCCGGCCTCGC
CCCCCAGCCACCGGTGGACCCGCCGTGCAGCGGCATCCAGAGGCTTCTGCCCGTCCGCGCCGGTGACCCGGTACGGCCTC
GTCTACGTGGGCCTGGGCGACGGCGTCTACCGCGCGCTGGACCAGCGGACGGGCGCGGTGCGGTGGCGGGCCGGCGCCCC
GGCGGCGCGGGCCGGCGGTGGGAGCGGGGAGGGGTTCGGCGCCGCCGCGTTGCCCGCCCCGGTGGTCTACGACGGACTCG
CCTACTACTGCGTTCCCGGCGGCCCCCTGCGAGCGGTGGACGCCCGCAAGGGCGCGGAAATCTGGCAGGTGGCGCCGGCA
GACGCCCTGAGCACCCCCCTGGCCGGGGACGGCATCGTGTACTGCGGTCACGAAGGCGGCGTGGTGGCGGTGGAGGCGAA
GACCGGCGCCCTGGCCTGGAACGCCCGGCTGGACGGCGGGGTGGCGCAGCCTGTGGCCCTGGGCGACGGCCGGTTGTTCG
CCGCCACCGAGGCGGGGACGCTCTGGGCGCTGGACGCGCTCACCGGCGAGCCGCTCTGGCGGGCGGAGGCGGCCGCAGGC
GCACCCGTCTTTGCGGAACTGGTGGTAGCCCTGGGCGGCCAGGCGTTTGACGCGCTGACCGGGGAGCTCATCTGGCGCCG
GACCGACCTCGGCGGCACCCCGGCGGTGCGCGGGGAAGCCGTCTGCTACCCAGGACGCTGGGTCGACCTGTTCACGGGCC
GCACGGTGGCGGAGGCCGACGGCGAGGCGCCGCCGGCCGGGGCGCCGCACCTGCTGGCCGGGGATCTCCACCTCTGGGTC
ACGCCCGAGCCGGCTCTGGTCGCCTGGGACGCAGCCCGAAGGGAGCTGCGCTGGTCCGTTCCCCTGCCGGCCCCCGCGGT
GGCCATGGCGCCCGCGGACGGGTGGATCTTCGTGACCCTGGCGGACGGCTCGCTGGCGGCCTACAGCACGACCGCATCGG
AATGA

Upstream 100 bases:

>100_bases
CGCCGTGGACAGTTTTCGCGCGACGAACAGGAAAAATCTCCACGTGCAGACCGCCGGGCCCGGACCTGCGTAGCATGGGG
AAAAAGACGGAGGTCGGGGT

Downstream 100 bases:

>100_bases
GCCTGCGGACTCGCTGCATGTCGCGCACGCCTGGCAGGGAGACTAGGGGTGATCGACGGCAGACGAGGGAGGAGTGGCTG
TGCACAGGTGGCTGAAGTGG

Product: hypothetical protein

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: Glycoside Hydrolase Family; Spore Coat Assembly Protein SafA; Peptidase M; Spore Peptidoglycan Hydrolase; Pyrrolo-Quinoline Quinone; LysM Repeat-Containing Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT
VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL
VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA
DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG
APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV
TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE

Sequences:

>Translated_454_residues
MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT
VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL
VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA
DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG
APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV
TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE
>Mature_454_residues
MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT
VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL
VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA
DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG
APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV
TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.- [C]

Molecular weight: Translated: 47384; Mature: 47384

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGV
CEEEEECCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHH
VHRVRRGETALTLAARYGTTVKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRD
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCC
PRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGLVYVGLGDGVYRALDQRTGAV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCE
RWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA
EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCEEEECCCCCCCEEEECCC
DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGT
HHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCEEEEECCCC
LWALDALTGEPLWRAEAAAGAPVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEA
EEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCE
VCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWVTPEPALVAWDAARRELRWSV
EEECCCEEEEECCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCEEEEC
PLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE
CCCCCCEEECCCCCEEEEEEECCCEEEEECCCCC
>Mature Secondary Structure
MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGV
CEEEEECCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHH
VHRVRRGETALTLAARYGTTVKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRD
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCC
PRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGLVYVGLGDGVYRALDQRTGAV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCE
RWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA
EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCEEEECCCCCCCEEEECCC
DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGT
HHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCEEEEECCCC
LWALDALTGEPLWRAEAAAGAPVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEA
EEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCE
VCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWVTPEPALVAWDAARRELRWSV
EEECCCEEEEECCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCEEEEC
PLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE
CCCCCCEEECCCCCEEEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA