Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is veg [H]

Identifier: 51894382

GI number: 51894382

Start: 3461496

End: 3461774

Strand: Reverse

Name: veg [H]

Synonym: STH3247

Alternate gene names: 51894382

Gene position: 3461774-3461496 (Counterclockwise)

Preceding gene: 51894383

Following gene: 51894381

Centisome position: 97.07

GC content: 60.93

Gene sequence:

>279_bases
TTGGCTTCCAGGAGCGTTCTAGTGGACATCAAGCGGGACCTCGAGGCGTACGTGGGGTCAAAGATCCGCCTGAGAGCCAA
TAAGGGCCGCAAGAAGATCGTCGAGCGCGAAGGGGTACTGGAAGGTACATACCCGAACATCTTCACCGTCAGGCTTTCCG
AAGCAGACTCGGTGCGCCGCGTCAGCTACAGCTACGCGGACCTGCTTACGGAGACGGTGGAGCTGGTGGTCTGCTCCGCG
AGCGGCACGGAGACCAAGTTCGAGGCGCATTCCCGCTAG

Upstream 100 bases:

>100_bases
AATACTGTTTTCCTTGACTCTGGGAGCCTGGCCTGCTATACTAAGATCGTGAACGATTTCGCCAGCCGACGCGGCGACGA
GCGGGAAGGTGTGGTGGCAG

Downstream 100 bases:

>100_bases
GCGACCCGAGACAAGAGCCAGGGAGAATCCCTGGCTTTTTCGGTGTGTGGAGGGAAATCCGGATGGAAATCGAATGCCAC
GCAAAGGTGAACCTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSA
SGTETKFEAHSR

Sequences:

>Translated_92_residues
MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSA
SGTETKFEAHSR
>Mature_91_residues
ASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSAS
GTETKFEAHSR

Specific function: Unknown

COG id: COG4466

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009366 [H]

Pfam domain/function: PF06257 DUF1021 [H]

EC number: NA

Molecular weight: Translated: 10324; Mature: 10193

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRR
CCCCCEEEEHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHH
VSYSYADLLTETVELVVCSASGTETKFEAHSR
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRR
CCCCEEEEHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHH
VSYSYADLLTETVELVVCSASGTETKFEAHSR
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 6181373 [H]