| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894377
Identifier: 51894377
GI number: 51894377
Start: 3457394
End: 3457624
Strand: Reverse
Name: 51894377
Synonym: STH3242
Alternate gene names: NA
Gene position: 3457624-3457394 (Counterclockwise)
Preceding gene: 51894378
Following gene: 51894376
Centisome position: 96.96
GC content: 73.59
Gene sequence:
>231_bases ATGGCGCATCGGCCTGCCTCGTGGTTCCGGAATGTGGCGGTCGCCGGCCTGGTGGTCGCGCTGGCCATGGTTCCGGCGAT CGCGGCGCTCCTGCACGGCGCCCTGCCGCTCTGGCTCCACATCCCGCTGACGGTGCTGGCCCTGTCGCTGCTGGCACTGG GCTCCGCGGCGGCGGGGGTTGCGGCGGTGGAGTTCCGGCAGCGCCAGCAGCCGGCGAAGAGTGGGGAGTAG
Upstream 100 bases:
>100_bases CCGCCATGTCGATGAGATTCTCGCCACCCTCAAGGCGAAGGGGTATCATGTCTGGATCATTCCGCCGTATCGTCCCAACG ACTGGTAGGAGGTGTGAGCG
Downstream 100 bases:
>100_bases CCGGGAAGAAGGGGGCTTCGGCCCCCCTTCTTCGCGCATCTGTCAGGTATGGGAACTCCCGGTCGGGTCTGCGAACATTT GCACGGTATTCGCGGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE
Sequences:
>Translated_76_residues MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE >Mature_75_residues AHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7858; Mature: 7727
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVEFRQRQQPAKSGE HHHHHHHHHCCCCCCC >Mature Secondary Structure AHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVEFRQRQQPAKSGE HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA