Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894377

Identifier: 51894377

GI number: 51894377

Start: 3457394

End: 3457624

Strand: Reverse

Name: 51894377

Synonym: STH3242

Alternate gene names: NA

Gene position: 3457624-3457394 (Counterclockwise)

Preceding gene: 51894378

Following gene: 51894376

Centisome position: 96.96

GC content: 73.59

Gene sequence:

>231_bases
ATGGCGCATCGGCCTGCCTCGTGGTTCCGGAATGTGGCGGTCGCCGGCCTGGTGGTCGCGCTGGCCATGGTTCCGGCGAT
CGCGGCGCTCCTGCACGGCGCCCTGCCGCTCTGGCTCCACATCCCGCTGACGGTGCTGGCCCTGTCGCTGCTGGCACTGG
GCTCCGCGGCGGCGGGGGTTGCGGCGGTGGAGTTCCGGCAGCGCCAGCAGCCGGCGAAGAGTGGGGAGTAG

Upstream 100 bases:

>100_bases
CCGCCATGTCGATGAGATTCTCGCCACCCTCAAGGCGAAGGGGTATCATGTCTGGATCATTCCGCCGTATCGTCCCAACG
ACTGGTAGGAGGTGTGAGCG

Downstream 100 bases:

>100_bases
CCGGGAAGAAGGGGGCTTCGGCCCCCCTTCTTCGCGCATCTGTCAGGTATGGGAACTCCCGGTCGGGTCTGCGAACATTT
GCACGGTATTCGCGGTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE

Sequences:

>Translated_76_residues
MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE
>Mature_75_residues
AHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGVAAVEFRQRQQPAKSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7858; Mature: 7727

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEFRQRQQPAKSGE
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AHRPASWFRNVAVAGLVVALAMVPAIAALLHGALPLWLHIPLTVLALSLLALGSAAAGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEFRQRQQPAKSGE
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA