| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894327
Identifier: 51894327
GI number: 51894327
Start: 3400139
End: 3401011
Strand: Reverse
Name: 51894327
Synonym: STH3192
Alternate gene names: NA
Gene position: 3401011-3400139 (Counterclockwise)
Preceding gene: 51894328
Following gene: 51894326
Centisome position: 95.37
GC content: 70.68
Gene sequence:
>873_bases GTGCCCAACTTCAGCGAGGGGCGGCGGCCGGAGGTGATCGAGGCCATCGCCGGGGCCATCGCGGCCCAGGGGGTGAAGGT GCTGTCGGTCTCCGCCGACGTCGACCACAACCGCTGCGTCGTCACCTTCATCGGATCCCCGGAGGCCGTGGTCCGGGCCG CCCTGCGGGGGGCGGAAGCGGCCATCCGGCTCATCGACCTGAACCACCACAAGGGCAGCCACCCGCGCATGGGCGCGGTG GACGTCATCCCCTTCGTGCCGGTCTCGGGGTGCACCATGGAGGACTGCGTGGCCCTGGCCCGGCAGGTGGGCGAGGCGCT GGGCAACATGGGGGTGCCGGTCTTCCTCTACGAGGAGGCGGCGACCCGCCCTGACCGGCGCAACCTGGCCGACGTGCGCC GGGGGGAGTTCGAGGGGCTCAGGGAGCTGATCGGCGTCGACCCGGCGAAGGACCCCGACTTCGGCCCCCGGAAGATCCAC CCCACCGCGGGGTGCACCGCCGTGGGCGCGCGGATGCCGCTCATCGCCTTCAACGTCAACCTGGGCACGTCCGACCTGTC CATCGCCAGGAAGATCGCGAAGGCGGTGCGCGGCTCCAGCGGCGGTCTCGTCCACTGCAAGGCCATCGCGGTGCCCCTCG CCGACCGGAACCAGGTGCAGGTCAGCATGAACATGGTCAACTACAAGGAGACGCCACTGCACAGGGCGTTTGAGCTGATC CGGATCGAGGCCGAGCGGTACGGCGTGCCGGTGGTGGGGTCGGAGATCGTCGGGCTGGTGCCCGTGGACGCTCTGGTGGG TGTGGCCCGCCACTACCTGCGGCTGGAGGGGTTCAAGACCGACCAGGTCCTGGAGAAGCGGCTGGTCGACTGA
Upstream 100 bases:
>100_bases CGGGAGCGGGGCATCCGGCTGCCCATGTACGAGTGAGCCGGGCGTGGAGGACAACCGGGGAGGAGGCGGTCCCTTGAATC CGAACGCGCTGGTTGAGTGC
Downstream 100 bases:
>100_bases GGGCGGTGATGCGGTTGAGGCCCGTGGATCTCCTGATCGTGGGCGCGGGCGAACTGGTGACGATGGCCGGGGGCCCGCGG CGGGGCGAGCGGATGAAGGA
Product: glutamate formiminotransferase
Products: NA
Alternate protein names: Glutamate Formimidoyltransferase; Formimidoyltransferase-Cyclodeaminase; Formiminotransferase-Cyclodeaminase; Formiminotransferase Domain Protein; Formiminotransferase-Cyclodeaminase-Related Protein; Formiminotransferase; Formimidoyltetrahydrofolate Cyclodeaminase; Formiminotransferase-Like
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPNFSEGRRPEVIEAIAGAIAAQGVKVLSVSADVDHNRCVVTFIGSPEAVVRAALRGAEAAIRLIDLNHHKGSHPRMGAV DVIPFVPVSGCTMEDCVALARQVGEALGNMGVPVFLYEEAATRPDRRNLADVRRGEFEGLRELIGVDPAKDPDFGPRKIH PTAGCTAVGARMPLIAFNVNLGTSDLSIARKIAKAVRGSSGGLVHCKAIAVPLADRNQVQVSMNMVNYKETPLHRAFELI RIEAERYGVPVVGSEIVGLVPVDALVGVARHYLRLEGFKTDQVLEKRLVD
Sequences:
>Translated_290_residues MPNFSEGRRPEVIEAIAGAIAAQGVKVLSVSADVDHNRCVVTFIGSPEAVVRAALRGAEAAIRLIDLNHHKGSHPRMGAV DVIPFVPVSGCTMEDCVALARQVGEALGNMGVPVFLYEEAATRPDRRNLADVRRGEFEGLRELIGVDPAKDPDFGPRKIH PTAGCTAVGARMPLIAFNVNLGTSDLSIARKIAKAVRGSSGGLVHCKAIAVPLADRNQVQVSMNMVNYKETPLHRAFELI RIEAERYGVPVVGSEIVGLVPVDALVGVARHYLRLEGFKTDQVLEKRLVD >Mature_289_residues PNFSEGRRPEVIEAIAGAIAAQGVKVLSVSADVDHNRCVVTFIGSPEAVVRAALRGAEAAIRLIDLNHHKGSHPRMGAVD VIPFVPVSGCTMEDCVALARQVGEALGNMGVPVFLYEEAATRPDRRNLADVRRGEFEGLRELIGVDPAKDPDFGPRKIHP TAGCTAVGARMPLIAFNVNLGTSDLSIARKIAKAVRGSSGGLVHCKAIAVPLADRNQVQVSMNMVNYKETPLHRAFELIR IEAERYGVPVVGSEIVGLVPVDALVGVARHYLRLEGFKTDQVLEKRLVD
Specific function: Unknown
COG id: COG3643
COG function: function code E; Glutamate formiminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI46255035, Length=286, Percent_Identity=45.4545454545455, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI11140815, Length=286, Percent_Identity=45.4545454545455, Blast_Score=221, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31160; Mature: 31029
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFSEGRRPEVIEAIAGAIAAQGVKVLSVSADVDHNRCVVTFIGSPEAVVRAALRGAEA CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCHHH AIRLIDLNHHKGSHPRMGAVDVIPFVPVSGCTMEDCVALARQVGEALGNMGVPVFLYEEA EEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC ATRPDRRNLADVRRGEFEGLRELIGVDPAKDPDFGPRKIHPTAGCTAVGARMPLIAFNVN CCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHCCCCCEEEEEEC LGTSDLSIARKIAKAVRGSSGGLVHCKAIAVPLADRNQVQVSMNMVNYKETPLHRAFELI CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHH RIEAERYGVPVVGSEIVGLVPVDALVGVARHYLRLEGFKTDQVLEKRLVD EEEHHHCCCCEECCCHHEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure PNFSEGRRPEVIEAIAGAIAAQGVKVLSVSADVDHNRCVVTFIGSPEAVVRAALRGAEA CCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCHHH AIRLIDLNHHKGSHPRMGAVDVIPFVPVSGCTMEDCVALARQVGEALGNMGVPVFLYEEA EEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC ATRPDRRNLADVRRGEFEGLRELIGVDPAKDPDFGPRKIHPTAGCTAVGARMPLIAFNVN CCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHCCCCCEEEEEEC LGTSDLSIARKIAKAVRGSSGGLVHCKAIAVPLADRNQVQVSMNMVNYKETPLHRAFELI CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHH RIEAERYGVPVVGSEIVGLVPVDALVGVARHYLRLEGFKTDQVLEKRLVD EEEHHHCCCCEECCCHHEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA