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The map label for this gene is dan [H]

Identifier: 51894305

GI number: 51894305

Start: 3376978

End: 3378426

Strand: Reverse

Name: dan [H]

Synonym: STH3170

Alternate gene names: 51894305

Gene position: 3378426-3376978 (Counterclockwise)

Preceding gene: 51894309

Following gene: 51894304

Centisome position: 94.74

GC content: 71.22

Gene sequence:

>1449_bases
GTGGAGGCAACCCCCATAGTATATGACCTCGTCATCGCCGGCGGCACCGTGGTCGACGGGACCGGCGCGCCCGGCTTCCG
GGGCGACGTGGCGGTCAGCGGCGACCGCATCGTCGCCGTGGGCGACGTCGGACCGTACCGGGCGGAACGGGTCATCGACG
CAACGGGGTTGGTGGTGGCCCCCGGGTTCATCAACCCCCATTCGCACACCCACGACGACCTGCTCAACCCCTTCATCGAG
CGGGACGCCAAGGCCTCGCTGATGCAGGGCATCACCACTGAGATCGGCGGCGTGGACGGCCGGTCGCCGGTGGACATCGG
CGCGTTCCTCTCCCGGCTTGAGGCGGAGGGGACGGGCGTCAACTACGGTACCTACCTGGGGCAGGGGTCCGTGCGCGCTC
ACGTGATGGGATGGGCCGAGGGACCGGCCGGCGAGGCGCAGCTGGCGGAGATGAAGCGGCTGGTGCGCGAGGGCATGGAG
GACGGGGCCCTGGGCCTCTCCACCGGGCTCGAGTACCAGCCCGGGTCCTTCGCCGGAACGGCGGAGTTGGTGGAACTGGT
GAAGGAGACCGCCCCTTACGGCGGCATCTACGCCACGCACATGCGCAGCGAGGGCGACGCCCTGGTGGAGGCGATCGAGG
AGGCGCTGGAGATCGGTCGGCAGGCCGGCGTCCCCGTGAACCTTTCGCACCTGAAGATCGTGCACTACCGGAACTGGGGC
AAGGAGGACGAGGTCGTCCGTCTGATCGAGGAGGCCCGGGCCGCCGGGCAGCGGGTCTTTGCCGACGTCTATCCCTACCG
GGCGCCGGACTACGCGGTCAACCGCCCCCTCGCGGAGTGGGCTTCGGCCCTGCCGCCGGAGCACCTGCTGATCGTCGACG
GGGCGCCCGGGGAGCTGCAGGGGCTGACCGTGGCAGAGGCCGCCGCACTGCTGGGCCTGCCGGAATCCGAAGCGGCCCGG
AGTCTTCTGGCGCGGCACCCGAACACCCGGGTCGTGGCGCTGGTCTCCAGCGAGCGGGCGATGCACCGGTTCTACGCGGC
GGACTGGTCCGTCGTCTCCACCGACGGGGAAGCGCAACCGAAGCTGGCCACGGCGGCGGAGGCGCGCGCCTACGCGTTCC
ACCGGCGCTCCTACGGCACCTACCCCCAGCTGTTCGAGGAGCTGGTGCGCAAGCGCGGGGTGCTCACGCTGGAGCAGGCC
GTCCGCAAGTCCACCGGCCAGGTGGCGGACGAGCTGGGCCTGAAGAGCAGGGGCTACGTCAAGCCCGGGCAGTACGCCGA
CCTCGTGCTGTTCGATCCGGCGACCGTTGCCGACCGGACGACCTGGCTGAGCCCGCAGGAGTACCCCGAAGGCATTGCCT
ACGTGCTGGTCAACGGCCACGTGGTGGTGGACCGGGGCGAGTGGGTCGGCGGGCGCCACGGCCGGATCATCCGGCGGGGC
GAGGAGTGA

Upstream 100 bases:

>100_bases
CAGTTGCTCCGCACCGCCTGCGGGTCCTGCCGGGGCGGCGGAGGGCGGCGGTGCTGCCGGAGGCGAGCCCCCTGGCAGGG
GCGCCGCAGACCCGCCCGCG

Downstream 100 bases:

>100_bases
GGGCCGGCGCTCCGGCCCGCGGAGAGGAGGACCTGGCGATGGCCTTCTGGTTGATGAAGACCGAACCAACCGTCTACAGC
TACGACGACCTGGAGCGTGC

Product: D-aminoacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MEATPIVYDLVIAGGTVVDGTGAPGFRGDVAVSGDRIVAVGDVGPYRAERVIDATGLVVAPGFINPHSHTHDDLLNPFIE
RDAKASLMQGITTEIGGVDGRSPVDIGAFLSRLEAEGTGVNYGTYLGQGSVRAHVMGWAEGPAGEAQLAEMKRLVREGME
DGALGLSTGLEYQPGSFAGTAELVELVKETAPYGGIYATHMRSEGDALVEAIEEALEIGRQAGVPVNLSHLKIVHYRNWG
KEDEVVRLIEEARAAGQRVFADVYPYRAPDYAVNRPLAEWASALPPEHLLIVDGAPGELQGLTVAEAAALLGLPESEAAR
SLLARHPNTRVVALVSSERAMHRFYAADWSVVSTDGEAQPKLATAAEARAYAFHRRSYGTYPQLFEELVRKRGVLTLEQA
VRKSTGQVADELGLKSRGYVKPGQYADLVLFDPATVADRTTWLSPQEYPEGIAYVLVNGHVVVDRGEWVGGRHGRIIRRG
EE

Sequences:

>Translated_482_residues
MEATPIVYDLVIAGGTVVDGTGAPGFRGDVAVSGDRIVAVGDVGPYRAERVIDATGLVVAPGFINPHSHTHDDLLNPFIE
RDAKASLMQGITTEIGGVDGRSPVDIGAFLSRLEAEGTGVNYGTYLGQGSVRAHVMGWAEGPAGEAQLAEMKRLVREGME
DGALGLSTGLEYQPGSFAGTAELVELVKETAPYGGIYATHMRSEGDALVEAIEEALEIGRQAGVPVNLSHLKIVHYRNWG
KEDEVVRLIEEARAAGQRVFADVYPYRAPDYAVNRPLAEWASALPPEHLLIVDGAPGELQGLTVAEAAALLGLPESEAAR
SLLARHPNTRVVALVSSERAMHRFYAADWSVVSTDGEAQPKLATAAEARAYAFHRRSYGTYPQLFEELVRKRGVLTLEQA
VRKSTGQVADELGLKSRGYVKPGQYADLVLFDPATVADRTTWLSPQEYPEGIAYVLVNGHVVVDRGEWVGGRHGRIIRRG
EE
>Mature_482_residues
MEATPIVYDLVIAGGTVVDGTGAPGFRGDVAVSGDRIVAVGDVGPYRAERVIDATGLVVAPGFINPHSHTHDDLLNPFIE
RDAKASLMQGITTEIGGVDGRSPVDIGAFLSRLEAEGTGVNYGTYLGQGSVRAHVMGWAEGPAGEAQLAEMKRLVREGME
DGALGLSTGLEYQPGSFAGTAELVELVKETAPYGGIYATHMRSEGDALVEAIEEALEIGRQAGVPVNLSHLKIVHYRNWG
KEDEVVRLIEEARAAGQRVFADVYPYRAPDYAVNRPLAEWASALPPEHLLIVDGAPGELQGLTVAEAAALLGLPESEAAR
SLLARHPNTRVVALVSSERAMHRFYAADWSVVSTDGEAQPKLATAAEARAYAFHRRSYGTYPQLFEELVRKRGVLTLEQA
VRKSTGQVADELGLKSRGYVKPGQYADLVLFDPATVADRTTWLSPQEYPEGIAYVLVNGHVVVDRGEWVGGRHGRIIRRG
EE

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 51822; Mature: 51822

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATPIVYDLVIAGGTVVDGTGAPGFRGDVAVSGDRIVAVGDVGPYRAERVIDATGLVVA
CCCCCEEEEEEEECCEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHCCCCCEEEE
PGFINPHSHTHDDLLNPFIERDAKASLMQGITTEIGGVDGRSPVDIGAFLSRLEAEGTGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
NYGTYLGQGSVRAHVMGWAEGPAGEAQLAEMKRLVREGMEDGALGLSTGLEYQPGSFAGT
CCHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
AELVELVKETAPYGGIYATHMRSEGDALVEAIEEALEIGRQAGVPVNLSHLKIVHYRNWG
HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHEEEEEECCCC
KEDEVVRLIEEARAAGQRVFADVYPYRAPDYAVNRPLAEWASALPPEHLLIVDGAPGELQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCEEEEEECCCCCCC
GLTVAEAAALLGLPESEAARSLLARHPNTRVVALVSSERAMHRFYAADWSVVSTDGEAQP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCC
KLATAAEARAYAFHRRSYGTYPQLFEELVRKRGVLTLEQAVRKSTGQVADELGLKSRGYV
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KPGQYADLVLFDPATVADRTTWLSPQEYPEGIAYVLVNGHVVVDRGEWVGGRHGRIIRRG
CCCCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEEECEEEEECCCCCCCCCCCEEECC
EE
CC
>Mature Secondary Structure
MEATPIVYDLVIAGGTVVDGTGAPGFRGDVAVSGDRIVAVGDVGPYRAERVIDATGLVVA
CCCCCEEEEEEEECCEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHCCCCCEEEE
PGFINPHSHTHDDLLNPFIERDAKASLMQGITTEIGGVDGRSPVDIGAFLSRLEAEGTGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
NYGTYLGQGSVRAHVMGWAEGPAGEAQLAEMKRLVREGMEDGALGLSTGLEYQPGSFAGT
CCHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
AELVELVKETAPYGGIYATHMRSEGDALVEAIEEALEIGRQAGVPVNLSHLKIVHYRNWG
HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHEEEEEECCCC
KEDEVVRLIEEARAAGQRVFADVYPYRAPDYAVNRPLAEWASALPPEHLLIVDGAPGELQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCEEEEEECCCCCCC
GLTVAEAAALLGLPESEAARSLLARHPNTRVVALVSSERAMHRFYAADWSVVSTDGEAQP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCC
KLATAAEARAYAFHRRSYGTYPQLFEELVRKRGVLTLEQAVRKSTGQVADELGLKSRGYV
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KPGQYADLVLFDPATVADRTTWLSPQEYPEGIAYVLVNGHVVVDRGEWVGGRHGRIIRRG
CCCCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEEECEEEEECCCCCCCCCCCEEECC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]